Lelliottia jeotgali: LJPFL01_3386
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Entry
LJPFL01_3386 CDS
T05035
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lef
Lelliottia jeotgali
Pathway
lef03410
Base excision repair
lef03430
Mismatch repair
lef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJPFL01_3386
03430 Mismatch repair
LJPFL01_3386
03440 Homologous recombination
LJPFL01_3386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_3386
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LJPFL01_3386
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LJPFL01_3386
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LJPFL01_3386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ASV56749
LinkDB
All DBs
Position
complement(3631276..3633009)
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AA seq
577 aa
AA seq
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MKANTTLRRREVDESVDLPADLSPLLRRLYAGRGVRAATELERSVKGMLPWQQLSGIEKA
TEILYDALREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPE
VVDQAHARGAQLILTVDNGISSHSGVDRAHQLGIPVVVTDHHLPGDTLPAAEAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRALLRDKGWFEARGIAVPNLAEYLDLVALGTVADVVPL
DTNNRILTWQGLGRIRAGKCRPGIKALLEISNRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSTDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLMIKFGGHAMAAGLSLEEAKFDEFQRLFSELVTDWLDPALLQGEVVSDGALSGAEMTME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVNGGPLLDGIAFNVDTA
IWPDSGVREVELAYKLDINEFRGNRSLQIIIDHIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccaacacaacattacgccgccgcgaggtggatgaaagcgttgatttacctgcc
gatctatctccgctcctgcgccgtttatacgccgggcgcggcgttcgcgcggccacagag
ctggagcgcagcgtcaaagggatgctgccctggcagcagctcagtggcatcgaaaaagcg
acggaaattctctatgacgcactgcgcgaagggacgcggattgtcgtagtcggtgatttc
gacgccgatggcgcgaccagcaccgctctaagcgtcctcagcctgcgcgcgttgggctgc
gataacgtcacctatctggtgccgaaccgttttgaagacggttacggcctcagcccggaa
gtggtcgatcaagctcacgctcgcggggcgcagttgatcctgacggttgataacgggatc
tcatctcattctggcgtcgatcgggcgcatcagcttgggatcccggtcgtggtcaccgat
caccatttgcccggcgacacgctgccagcggctgaagccatcattaacccgaacctgcgc
gactgcgatttcccctcgaaatcgcttgcgggcgtaggcgtagcgttttatctgatgctg
gccctgcgtgcgttgctgcgcgataaaggctggttcgaggcgcgcggaattgcagttcct
aatcttgccgaatatctcgatttagtcgcgctcggcacggtggcagacgtggtgccactc
gacactaataaccgcattctgacctggcaagggctgggcaggattcgtgcggggaaatgc
cgtccggggattaaagcgctgctcgaaatctctaatcgtgacccgcttaaactcgcggca
agtgacctcgggtttgcccttggcccgcgtctcaatgcggcagggcgactggatgatatg
tccgtcggggtggcgctgctgctctgcgacaatatcggcgaagcccgcgtgttagccaat
gaactcgacgcgctgaatcagacgcgcaaggagatcgagcaagggatgcaggctgaagcc
ctgactctgtgcgaaaaacttgagcgcagcaccgacacgctgccaggcggcctggcgatg
taccacccggagtggcatcagggcgtggtcgggattctggcgtcgcgcatcaaagagcgt
tttcaccgtccggtgattgcctttgccccggcgggcgacggtacgcttaaaggctcgggt
cgttccattcaagggctgcacatgcgcgatgcactggagcgtctggacacactctatcct
gggctgatgatcaaattcggcggccacgcgatggcggctggtttatcactagaagaggcg
aaattcgacgagtttcagcggcttttcagcgagctggttaccgactggctggacccggcg
ttactgcagggcgaagtggtctctgatggcgcgctgtctggcgcggagatgacgatggaa
gtcgcgcagatgctgcgcgatgccggtccgtgggggcagatgtttccggagccgctgttc
gacggtcgattccgcctgctgcaacagcgtctggtgggtgagcgtcacctgaaggtgatg
gtcgagccggtgaacggtggcccgctgctggatggaatcgcctttaacgtcgacaccgcc
atctggccggatagcggtgtgcgtgaagttgaactggcctacaaactggatattaacgag
tttcgcggtaatcgcagtttgcagattatcatcgatcatatctggccaatttag
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