Leptospirillum sp. Group II: ABH19_05540
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Entry
ABH19_05540 CDS
T04007
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
leg
Leptospirillum sp. Group II
Pathway
leg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
leg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABH19_05540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leg03021
]
ABH19_05540
03400 DNA repair and recombination proteins [BR:
leg03400
]
ABH19_05540
Enzymes [BR:
leg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABH19_05540
Transcription machinery [BR:
leg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABH19_05540
DNA repair and recombination proteins [BR:
leg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABH19_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AKS23325
LinkDB
All DBs
Position
complement(1076774..1077178)
Genome browser
AA seq
134 aa
AA seq
DB search
MNDLVTRPIEVTPDIIDSRYRLVIAAAKRARQLMEGAPVRVEKRYLKETTTALQEIVEKK
IPIITGEEAVRIEAGRREKLRERARLEERFSYSRGYALDPSDVIHADVMTYHHPEDSTQA
VEGEHEAEDADTED
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctcgtcacacgccccatcgaagttacacccgatattatcgacagccgctat
cgactcgtcatcgccgccgcgaaacgcgcgcgacagctgatggagggtgctccggtcagg
gtcgaaaagcgctacctgaaagaaaccaccaccgccctgcaggaaattgtagaaaaaaag
attccgatcatcaccggagaagaagctgtccggatcgaggccgggcgccgggaaaagctc
cgcgagcgtgcccgtttggaagagcggttttcctattcccgcggatatgccctcgatccc
tcggatgtcatccatgcggatgtcatgacttaccatcatccggaggattccacccaggcg
gtggaaggcgagcatgaagccgaggacgcggacaccgaggattga
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