Leptospirillum sp. Group II: ABH19_07610
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Entry
ABH19_07610 CDS
T04007
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
leg
Leptospirillum sp. Group II
Pathway
leg03410
Base excision repair
leg03430
Mismatch repair
leg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABH19_07610
03430 Mismatch repair
ABH19_07610
03440 Homologous recombination
ABH19_07610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leg03400
]
ABH19_07610
DNA repair and recombination proteins [BR:
leg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABH19_07610
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABH19_07610
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABH19_07610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
AKS23636
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Position
complement(1484451..1486100)
Genome browser
AA seq
549 aa
AA seq
DB search
MDIEYESRKSKPGWLLPSVMDSDVSDLAKEIGLDPIWARFLLGRGFHWDSLDEFFFHPQP
PGEESVGDIRLAQNILGDALDERAPIAIYADLDVDGITSAVMCSRFLSRRQHPHRVLLVR
REEGHGVNPDRILSLPQEGFRVLIVADLGVSNLPLLQEAGRRGLASIVVDHHLLQEPWPN
DMAIVHPQGRSHLTAVGCLYVLLRSLVKHPEEREMAFLAGLAVLSDRAPILHENRYFVQA
LLDREILEAFPGVRALLRKRVHRKIMINDYSFWVIPSLNAPGRMSDPLPAFHLLMARTSS
EAERYSIQVMEMNRRRREAEWSIYEEARRQWDGTPVLFAPDWAPGVMGRIAHRLSEEFDQ
SVFVATLSPNGGVRGSLRLRGGITLSDILKELEGLPISGGGHPKAGGLGFPVELLETVRK
VLGNILKEPSPCPEVQDSSSLEIDAFLPASYRSPSFWEGLGKLVPFGEGFPEPLFGIRNV
QIERMESTNSRLVLCHFRWSHGTEKAAFRQTSNLPKPGDRVDLVMTPELVGKGDHVERHF
SIRRYRSAG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaatacgaaagtcggaagtcgaagcctggatggcttctcccttccgtcatg
gattcggatgtttccgatctggcaaaggaaattggcctggatccgatctgggctcgcttt
ttgctgggccgggggtttcactgggattctctggatgagttttttttccatccgcagcca
ccgggggaggaatcggtgggggatatccgtcttgcccagaacatccttggagatgcgctg
gatgagcgagcccctattgcgatttatgcggatctcgatgtcgatggtattacttcggcc
gtcatgtgttcacgattcctgtcccggagacagcacccccatcgtgtgctgctcgttcgg
cgggaggaaggccatggtgtcaatcccgaccgcattctctctctcccgcaggaaggcttc
agagtcctgatcgttgccgatctcggagtctcgaatcttcctctccttcaggaagccggc
cgaagaggccttgcttctatcgttgtggatcaccatcttttgcaggaaccctggccgaat
gacatggcaatcgtccacccccagggcagatcccacctgacagctgtcggttgcctctat
gtgcttctccggtcactggtcaaacatccggaagaacgggagatggcgtttttggccggc
ctggcggttctttcggacagagctcccatcctccacgaaaaccggtatttcgtccaggct
ctgcttgaccgtgaaatcctggaggcctttccgggggttcgggccttgctccggaaacgg
gtccaccgcaagatcatgatcaacgattattccttctgggtgattccctccctgaatgct
cccggtcggatgtccgatcctttgccggcatttcatctgctgatggcccggacatcctct
gaagccgaacggtattccattcaggtcatggaaatgaaccgccggagaagagaggccgag
tggagcatctacgaggaagcccgcagacagtgggatgggacccctgttctctttgctccg
gactgggctcccggcgtcatgggccggatcgcccaccggttgagtgaagaatttgatcag
tccgtctttgttgccacgctgagccccaatggaggagttcgtggttccctgcgtctcagg
ggaggaatcacattgtccgacattctgaaggagctagagggactcccgatctccggggga
ggacatccgaaggccggcgggctcgggtttccggtcgaacttctggaaacggtccgaaag
gtgctcggaaacattctgaaggaaccctctccctgtccggaagttcaggattcctcctcg
ctggaaatcgacgcctttcttcctgcctcctaccggtcgccttccttctgggaaggcctg
ggaaagcttgttccgttcggcgagggatttccggagccgctttttggcatccggaacgtt
cagatcgagcggatggagtcgacgaacagccgtcttgtcctctgccatttccgctggagc
cacggaaccgaaaaggcagccttcagacagacctcaaatctgcccaagccgggagacagg
gtggacctcgtcatgacaccggaacttgtcggaaagggagatcacgttgagcggcatttc
tccatccgtcgctaccgatccgcaggatag
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