Leptospirillum sp. Group II: ABH19_07970
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Entry
ABH19_07970 CDS
T04007
Name
(GenBank) DNA-directed RNA polymerase subunit sigma-24
KO
K03092
RNA polymerase sigma-54 factor
Organism
leg
Leptospirillum sp. Group II
Pathway
leg02020
Two-component system
leg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
leg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABH19_07970
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABH19_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leg03021
]
ABH19_07970
Transcription machinery [BR:
leg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABH19_07970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AKS24791
LinkDB
All DBs
Position
complement(1554544..1555965)
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AA seq
473 aa
AA seq
DB search
MVMTPQLQQAIHLLMLAKLDLREEILQETQTNPLLELEEEGDWEDSVPESSIDHLPADSE
NRETVPEEETNPDPLMSWDYSLHEDMDDSGLYQEERSIREDPESDFSYEKVLAAPTTLED
HLIWQISFREMSPVEKELAHFLIGNINEDGYLAVSEEEIPESLRTDPEMFPRVLSWIQEC
DPPGVGARNLRECLMIQARMLHLEKTVVWSVLESQLDEFMEMKYKGIARALSVSVEDIQE
AGKIIRKLEPKPGRPYFRDMAMPISPDVRFYDAGHGEIRVGLNEEGVPRLRIQSAYKSLL
KTMEKKDKTREYIEEKLRSAMWFMKSIEQRKKTILRVAEAILRHQEDFFRRGPLGLKPLV
LKTIAQDLGLHESTISRVTNQKYAETPFGIVELKFFFSGGLPSQSGSEHSSVSVREKIRD
MVHGESKSAPLTDQEIMNRLGKEGIVIARRTVAKYRMELDIPPVNKRKQERAV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgactccccagctccagcaggccattcatcttttgatgcttgcgaagctggac
ctgagagaggaaatcctgcaggaaacccagaccaatccacttctcgaactggaagaagaa
ggcgattgggaggattcggttcccgaaagctcgatcgatcaccttccagccgacagcgag
aaccgcgagaccgttccggaagaagagacgaatcctgacccgttgatgagctgggactac
tcccttcatgaagacatggacgactccgggctttaccaggaggaacgctccatccgggaa
gacccggaaagcgatttttcctatgagaaggttctggctgctccgacgactctggaagac
catctcatctggcagatttcgtttcgggagatgtctccggtggagaaagagctggcacat
tttctgatcggaaacatcaatgaggatggttatctcgctgtttcggaagaggaaatcccc
gaatccctgaggacagaccccgagatgtttccccgtgttctctcctggatccaggagtgc
gaccctccgggcgtgggggctcgaaacctgagggagtgtctgatgatccaggctcgtatg
ctgcatcttgaaaagacggttgtctggtctgttctggaaagccaactcgatgagttcatg
gaaatgaaatacaagggaattgccagggcgctttctgtttccgtggaggatattcaggaa
gcgggaaaaatcattcgaaagctggagcccaaaccggggcgaccctattttcgggatatg
gcgatgcccatctctcccgatgtccggttttatgatgccggacatggagaaattcgtgtg
ggtctgaatgaagagggggtaccgaggttaagaattcaatcggcttataagtctcttctc
aaaacgatggaaaaaaaggataagacacgggagtatattgaagaaaagctgcgatcggcg
atgtggtttatgaagtcaattgagcagcgaaagaaaacgattttacgggttgcggaagca
attttgcgccaccaggaggatttttttcgtcgggggccgcttggcctcaagccacttgtg
ctgaaaacgattgcgcaggatctcgggttgcatgagtcgacgatttcccgggttacgaac
cagaaatatgccgaaacccctttcggcattgtggaactcaagttctttttttccggaggg
ttgccgtctcagtccgggtcggaacattcgtctgtcagtgtaagggaaaaaattcgcgac
atggttcatggagagtccaagagtgcgccactgacggatcaggaaatcatgaaccgtctg
gggaaggaagggatcgtcattgccaggaggactgtcgccaagtaccggatggaactcgat
attcccccggtcaacaagcgcaagcaggaacgcgcggtatga
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