Leptospirillum sp. Group II: ABH19_12165
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Entry
ABH19_12165 CDS
T04007
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
leg
Leptospirillum sp. Group II
Pathway
leg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
leg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABH19_12165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leg03021
]
ABH19_12165
Transcription machinery [BR:
leg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABH19_12165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
DUF5847
Motif
Other DBs
NCBI-ProteinID:
AKS24342
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Position
complement(2400809..2402605)
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AA seq
598 aa
AA seq
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MSKSEKLNEMKDLISLGKERGYLTYDELNNVLPPEAIGSDQLDNLMSYFGDMNIDIVDDE
SREAGYGEMDSEEEEGFSDLESVRGVDSEEEDEGIDMTPGTLSRIDDPVRLYLKEMGAVP
LLTREGEIAIAQRIEEGQKEVSGILFGMPLTVRSILSLREKFQTGQIGIREIVDVMEEET
EDEPEEGDSAALRDAREQFVRQTDSLSELFLKLNAISEKWKDAQKNTSKKKVLREQAKKI
KTEIVELIMEMNLHRKQVELMIRQLHDVVSVLDESERIIDHSRRRLGANKEDILKAIALL
KAGKDPGERYQDPEKLELLKNYQFALERVHEAEVAALLSSSEIRDSLSLLEAGEQKVREA
KAELIKANLRLVVSIAKRYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGFKFSTYATWWI
RQAITRAIADQARTIRIPVHMIETINKLIRTTRHLVQELGREPLPEELAKEMQMPVEKVR
RVLKIAREPISLETPIGEEEDSHLGDFIEDKKSISPIDSAVRYDLVRKIGKALSSLTERE
EKVIRLRFGVGESTDHTLEEVGQDFDVTRERIRQIEAKALRKLRHPSRSKHLKSFVDW
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagcgaaaaattaaacgagatgaaggatttgatcagtctcggaaaagaacgc
ggatatttgacttatgatgaactgaacaatgttcttcccccggaagcgatcggctcggac
cagctagataatctgatgtcttactttggcgatatgaatattgatatcgtcgatgacgag
tcgcgcgaagccggttatggagaaatggattccgaggaggaagagggattttcggatctg
gaatccgttcggggggtggacagcgaggaagaggacgaagggatcgatatgaccccggga
accctctcccggattgatgaccctgtgcgtctttacctgaaagaaatgggggcggttcct
ctcctgacgcgagaaggggaaatcgccattgcccagagaatcgaagaagggcaaaaagag
gtctccgggattctttttggaatgcctctgacagtccggagcattctttccctccgggaa
aagttccagacaggccagatcggtattcgtgaaatcgtggatgtcatggaggaagagacg
gaggatgagccggaagaaggggattctgctgccctgcgggatgcccgggaacagtttgtc
cgccagacagacagtctttctgagctcttcttgaagctgaatgccatttcggaaaaatgg
aaagatgcgcaaaagaatacttcaaagaagaaagttttgcgcgagcaggcaaaaaagatc
aagacagagatcgttgaactgattatggagatgaatctccatcggaaacaggtcgaactc
atgattcgtcagcttcacgatgttgtgagtgttctggacgaatcggaacggataatcgat
cattctcgccggaggctgggagcgaacaaggaagacattctgaaagccatcgccctcctg
aaggcggggaaagatcccggtgaacgttatcaggatcccgaaaagctggagcttctgaaa
aactaccagtttgcactggagcgcgttcacgaagcggaggtcgcggccctcctttcctct
tcagagatccgggacagcttgagtctcctggaagcgggcgagcagaaagtccgggaagcc
aaggccgaactgatcaaggcgaacctccgtctggttgtttctatcgccaagcgttataca
aacagggggcttcagttcctcgacctgatccaggaagggaacatcgggttgatgaaggcg
gtggacaagtttgaatataaaagagggttcaagttttcaacctatgccacgtggtggatc
cggcaagctataacgcgggcgattgcagatcaggcccggacaatccgtattcctgtccat
atgatcgaaacgatcaacaaactgatcaggacgacgcgccatcttgtgcaggagctgggt
cgcgaaccgttgccggaagagcttgcaaaagaaatgcaaatgccggtcgaaaaagtgcgt
cgggtcctgaagatagcccgggaaccgatctcccttgagacgcccatcggggaggaggag
gacagccatctgggagattttatcgaggacaagaagtctatttccccaatcgattcggct
gtccgttatgatctggttcgaaaaatcggaaaagcgctttcttctctgaccgaaagggaa
gaaaaagtgatccggttgcgctttggtgtgggggagtcgaccgatcatactctggaagaa
gtcggtcaggactttgacgtgacaagagagcgtattcgccagatcgaagcaaaggccttg
aggaagctgaggcatccaagccgcagcaagcacctcaagagttttgttgactggtaa
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