KEGG   Leptospirillum sp. Group II: ABH19_12165
Entry
ABH19_12165       CDS       T04007                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
leg  Leptospirillum sp. Group II
Pathway
leg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:leg00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ABH19_12165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:leg03021]
    ABH19_12165
Transcription machinery [BR:leg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ABH19_12165
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_1 Sigma70_r1_2 Sigma70_ner DUF5847
Other DBs
NCBI-ProteinID: AKS24342
LinkDB
Position
complement(2400809..2402605)
AA seq 598 aa
MSKSEKLNEMKDLISLGKERGYLTYDELNNVLPPEAIGSDQLDNLMSYFGDMNIDIVDDE
SREAGYGEMDSEEEEGFSDLESVRGVDSEEEDEGIDMTPGTLSRIDDPVRLYLKEMGAVP
LLTREGEIAIAQRIEEGQKEVSGILFGMPLTVRSILSLREKFQTGQIGIREIVDVMEEET
EDEPEEGDSAALRDAREQFVRQTDSLSELFLKLNAISEKWKDAQKNTSKKKVLREQAKKI
KTEIVELIMEMNLHRKQVELMIRQLHDVVSVLDESERIIDHSRRRLGANKEDILKAIALL
KAGKDPGERYQDPEKLELLKNYQFALERVHEAEVAALLSSSEIRDSLSLLEAGEQKVREA
KAELIKANLRLVVSIAKRYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGFKFSTYATWWI
RQAITRAIADQARTIRIPVHMIETINKLIRTTRHLVQELGREPLPEELAKEMQMPVEKVR
RVLKIAREPISLETPIGEEEDSHLGDFIEDKKSISPIDSAVRYDLVRKIGKALSSLTERE
EKVIRLRFGVGESTDHTLEEVGQDFDVTRERIRQIEAKALRKLRHPSRSKHLKSFVDW
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgagtaaaagcgaaaaattaaacgagatgaaggatttgatcagtctcggaaaagaacgc
ggatatttgacttatgatgaactgaacaatgttcttcccccggaagcgatcggctcggac
cagctagataatctgatgtcttactttggcgatatgaatattgatatcgtcgatgacgag
tcgcgcgaagccggttatggagaaatggattccgaggaggaagagggattttcggatctg
gaatccgttcggggggtggacagcgaggaagaggacgaagggatcgatatgaccccggga
accctctcccggattgatgaccctgtgcgtctttacctgaaagaaatgggggcggttcct
ctcctgacgcgagaaggggaaatcgccattgcccagagaatcgaagaagggcaaaaagag
gtctccgggattctttttggaatgcctctgacagtccggagcattctttccctccgggaa
aagttccagacaggccagatcggtattcgtgaaatcgtggatgtcatggaggaagagacg
gaggatgagccggaagaaggggattctgctgccctgcgggatgcccgggaacagtttgtc
cgccagacagacagtctttctgagctcttcttgaagctgaatgccatttcggaaaaatgg
aaagatgcgcaaaagaatacttcaaagaagaaagttttgcgcgagcaggcaaaaaagatc
aagacagagatcgttgaactgattatggagatgaatctccatcggaaacaggtcgaactc
atgattcgtcagcttcacgatgttgtgagtgttctggacgaatcggaacggataatcgat
cattctcgccggaggctgggagcgaacaaggaagacattctgaaagccatcgccctcctg
aaggcggggaaagatcccggtgaacgttatcaggatcccgaaaagctggagcttctgaaa
aactaccagtttgcactggagcgcgttcacgaagcggaggtcgcggccctcctttcctct
tcagagatccgggacagcttgagtctcctggaagcgggcgagcagaaagtccgggaagcc
aaggccgaactgatcaaggcgaacctccgtctggttgtttctatcgccaagcgttataca
aacagggggcttcagttcctcgacctgatccaggaagggaacatcgggttgatgaaggcg
gtggacaagtttgaatataaaagagggttcaagttttcaacctatgccacgtggtggatc
cggcaagctataacgcgggcgattgcagatcaggcccggacaatccgtattcctgtccat
atgatcgaaacgatcaacaaactgatcaggacgacgcgccatcttgtgcaggagctgggt
cgcgaaccgttgccggaagagcttgcaaaagaaatgcaaatgccggtcgaaaaagtgcgt
cgggtcctgaagatagcccgggaaccgatctcccttgagacgcccatcggggaggaggag
gacagccatctgggagattttatcgaggacaagaagtctatttccccaatcgattcggct
gtccgttatgatctggttcgaaaaatcggaaaagcgctttcttctctgaccgaaagggaa
gaaaaagtgatccggttgcgctttggtgtgggggagtcgaccgatcatactctggaagaa
gtcggtcaggactttgacgtgacaagagagcgtattcgccagatcgaagcaaaggccttg
aggaagctgaggcatccaagccgcagcaagcacctcaagagttttgttgactggtaa

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