Legionella sp. PC997: HBNCFIEN_00061
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Entry
HBNCFIEN_00061 CDS
T11595
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
legi Legionella sp. PC997
Pathway
legi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
legi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBNCFIEN_00061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
legi03021
]
HBNCFIEN_00061
03019 Messenger RNA biogenesis [BR:
legi03019
]
HBNCFIEN_00061
Transcription machinery [BR:
legi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HBNCFIEN_00061
Messenger RNA biogenesis [BR:
legi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HBNCFIEN_00061
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
AAA_22
NACHT
S1CSD-TOTE-2
ATPase_2
AAA
TAD2
Motif
Other DBs
NCBI-ProteinID:
QMT58708
LinkDB
All DBs
Position
71865..73127
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AA seq
420 aa
AA seq
DB search
MNLSELKQLPIADLFNIAQEIGVENPSRMRKQEIIFAILKAHALKGEDIHGDGVLEVLTD
GFGFLRSADGSYLAGPDDIYVSPSQIRRFGLRSGDTISGKIRPPKDSERYFALLKVDEIN
YDSPDSAKRKILFENLTPLFATERLVMEQGNGSTEDLTARVVDLCAPFGRGQRGLIVSPP
KAGKTLMLQNIARSIEKNYPECYLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPANRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALQRPKRL
YGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMEIHLSRNIAERRVFPAINI
NRSGTRREDLLLSPEDLQRTWILRKILQSMDECDAIEFLIERMKNHKTNAEFFDAMKRQE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagtgaacttaagcaattgcctattgccgatctttttaacatcgcacaagag
attggtgtcgaaaacccttcccgtatgcgcaaacaagaaattatttttgcgattcttaaa
gctcatgccttaaaaggtgaagacatccatggtgatggtgttttagaagtcctgacggat
ggtttcggtttcttgcgttctgccgatggttcttatttggcaggccctgatgacatttat
gtatcacctagccaaatcagacgtttcggtttgcgttctggcgatactatttccggtaaa
attcgtcctcccaaagacagtgaacgttattttgctttgttgaaagttgatgaaatcaac
tatgattccccggatagtgccaaaagaaaaattttatttgaaaaccttacccctctgttt
gctacagagcgcttggtgatggagcaaggaaatggcagcaccgaagatttgaccgcgcga
gtagttgatttatgcgcaccttttggtcgaggtcaacgtggcttgattgtttccccacct
aaagcgggtaaaacattaatgttgcaaaatattgcacgttctatagaaaagaattatcca
gaatgttacctcattgtgttgctgattgatgagcgtccagaagaagtaactgaaatgcaa
cgttctgtaaaaggtgaggtagttgccagtacctttgatgagcccgctaaccgccatgtt
caagttgctgaaatggtgattgaaaaagccaaacgcttagttgaacacaaacgtgacgtg
gttattttacttgactcaattactcgtttagctcgcgcatacaacacggtgattccttct
tctggtaaggtattaactggtggggtcgatgcgaatgcattgcaaagaccaaagcgtctc
tatggtgctgcacgaaatatagaagagggtggtagcctgactattattgctacggctctg
gtggacacaggttcaaaaatggatgaagtgatttacgaagaattcaagggaaccggtaac
atggaaattcacttgagtcgtaatattgcggaacgtcgagtgttccctgcaattaatatt
aatcgttcaggcacacgtcgtgaagatctattattaagcccagaagatcttcaacgtacc
tggatattgcgtaaaattctgcagtcgatggatgaatgtgatgcaattgagttcttgatc
gagcgcatgaaaaatcacaaaaccaatgctgaattttttgatgcaatgaaacgtcaagag
taa
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