Leclercia sp. LSNIH3: C3F35_00315
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Entry
C3F35_00315 CDS
T05316
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C3F35_00315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leh02000
]
C3F35_00315
Transporters [BR:
leh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C3F35_00315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AUY37341
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All DBs
Position
complement(65476..67095)
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AA seq
539 aa
AA seq
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MQTPFRLPLLTALILATTAAYAADTPVKGGTLVYLEQQAHTNLYPPAGGFYPNGGILNQI
TDKLTWQNPKTLEVEPWIAESWTTNADKTEYTFKIRPGVTFSDGTPLDASAVAKNFDTYG
KGNKAQRLPVSEVINNYDHSEVIDPLTVKFYFKKPSPGFLQGTATIGSGLVSLSTLKRNF
EELGDARHIIGSGPFVVKDEKLGREVNLQARKDYAWGPKNLAQQGPANLDGITYLVTPED
SVRVGALLAGQADFIRQVQAYDEKQATEQGYHIYAAPTRGVNDSISFRPDNPLVADVRVR
QALLHATNAKQVVDTLFSPNYPQAKSVIADSAAGFIDLSDKLTFDPAKASQLLDEAGWKA
GGDGIRAKDGQRLALTIYESLPQPQNKEVLQLVAQQWRQVGVALNVKAGDAGSHVLDNLD
PLKTPLTVSEVGRADPDVVKSMFYPNNRDALLQKGGSSDKVNSFRDDKLNDLLVNISAEV
EPQKRLQLTGDAQRYLLDNAYVIPIFEEPQVFAGAPWLKGVSFEAVGRPSFYGAWIEKH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccccatttcgcctgccgctgctgacggcgttaattcttgcgacaacggcggca
tatgcagccgatacgccggttaaaggcggcaccctggtctatctggagcaacaggcgcac
accaacctttatcccccggcgggcgggttttaccctaacggcgggatcctgaaccagata
accgacaagctgacctggcagaacccgaaaacccttgaggtggagccgtggatcgccgag
agctggaccaccaacgccgataaaaccgaatacaccttcaagatccgcccgggtgtgacc
ttctctgacggcacaccgcttgatgccagcgcggtcgcaaagaacttcgatacctacggc
aaaggcaacaaggcccagcgcctgccggtatcggaagtgatcaacaactacgaccacagc
gaagtcatcgacccgctgaccgtgaagttctacttcaaaaagccgtccccgggcttttta
caaggtactgcgaccattgggtccggcttagtctccctgagcacgttaaaacgtaacttt
gaagagctgggtgatgcccggcatatcatcggttccggcccgtttgtggtgaaagatgaa
aagctggggcgcgaagttaaccttcaggcgcggaaagactacgcctggggaccgaaaaac
ctcgcccagcaaggcccggcgaacctcgatggcattacctatctggttaccccggaagac
agcgttcgcgtcggcgccctgctggccggtcaggcggactttattcgccaggtgcaagcc
tatgacgaaaagcaggccaccgagcagggatatcacatctacgccgccccaacccgcggg
gtgaatgacagcatcagtttccgtccggataacccgctggtggcggatgtgcgggtgcgt
caggccctgctgcatgccactaacgccaaacaggtggtggacaccctgttctcaccaaac
tatccgcaggccaaatcggtgattgctgactccgcagcgggctttatcgacctcagcgac
aagctgacctttgatccagcgaaagccagccaactgctggatgaggcgggctggaaagcg
ggcggcgacggcatccgcgccaaagatggccagcgcctggccctgaccatctatgaatcc
ctgccgcagccgcagaataaagaggtgttgcagctggtggcgcagcagtggcgtcaggtg
ggagttgccctgaacgtgaaggccggtgatgccgggagccacgttctcgacaacctcgat
ccgctgaaaacgcccctcaccgtctcggaagtgggacgcgccgacccggacgtggtgaag
agcatgttctatccaaataaccgcgatgccctgctgcaaaaaggcggctccagcgacaag
gtgaacagcttccgcgacgacaagctcaacgacctgttagtgaacatctccgccgaagtt
gagccgcagaagcgcctccagctcaccggtgacgcccagcgctatctgctggataacgcc
tatgtgatccccatttttgaagagccacaggtctttgccggtgcgccctggctgaaaggg
gtaagttttgaagcggtcggacgcccgtcgttctacggcgcgtggatcgagaaacactaa
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