Leclercia sp. LSNIH3: C3F35_02420
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Entry
C3F35_02420 CDS
T05316
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C3F35_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Big_5
Big_3_3
He_PIG
DUF4625
GspA_SrpA_N
Kre9_KNH
Big_13
CopC
RibLong
Big_6
Motif
Other DBs
NCBI-ProteinID:
AUY37714
LinkDB
All DBs
Position
complement(485328..491303)
Genome browser
AA seq
1991 aa
AA seq
DB search
MIYTATATDTADISGGVTFSLKAGSDAGLTINPVTGAVTLTGNPDFENKASYSFTVVATD
AAGNHSSQAVTLGINNLDEVAPTITSGTTATAINENSGAGQIVYTATATDTADISGGVTF
SLQPGSDAGLTIDPVTGAVTLTGNPDFENKASYSFTVVATDAAGNHSSQAVTLGINNFDE
VAPSFTTGNSSDSYASATVNVAENIAASTAIYTAQANDNDAADGGEHVTYSLADENGAAD
AQYFSIDAVTGAVTFKSSPDYEGAHAPAYTFAVVATDAAGHTTRQTVTVNVTDVDEIAPT
VTLDGSSTGPVMLNTAPLNTYLNGYDTTALGDGTFLVTWASNNNGNLGIYAQRLSAQGVA
MGDPVQLASGATYTVMSSSDSILSVTALNDAGAYAVAWIGKDGTSSYSSIFAQSFNADGT
PLSAAAQLDGVASAHDLAPQIATLADGGYIVSWSINSGGIYVQRFDDTGVAVGNTVPLAV
SGSSGNASPQVTVLDNGSYVVTWQGYTTGDYHIYVQQFDATGNGTTPVMLDATTGTSNSY
ENLPQITALANGGYVVTWSGYNYSGSNYNNSTYVQQFDATGSRVGGIVVLDGSSNANNGG
SYTYPYVAALADGGYAITWMEYDNTNGYYNYKVYVQQFSAGGSKVGATVQLDAPHNSTSN
DRDQFPRITALGDGGYAVTWMSIGSSNWDIYVQKFNASGVAVGDMVRLEASGGASDLYPQ
VTAVGADGEYMVTWYGYSPGSGVSGYHLYVQKFNADGSTYDNLVVLNHDGQATVQSTETG
TVYLVNDNVVVSQLSDITGAASDQWASTAVIANTSATISAANLADGTYHAWAVDAAGNLS
VISGRSVVVDNTVPVFTSATTAADITDSTVAGDTVYTAAATDAHGVTYSLNDTQHFRINA
STGVVTLISSPDQASGAQFIVTATDAAGNQTTQTVTYNVVDTTPPGVMLVSDADGVENSG
EMVIVQSSEAGTVYLVSDSVTVTDLNSLNNAADNLVNSVAVAANVGTVLALNGLAEGTYH
AYAVDASGNVSAISGSSVTVDNTAPVISGGATANGTSLTSGAAAGTQVYDANASDAHAII
YSLDQDSLAWFDINAATGVVTLNSAAVAGSYNLVVTATDAAGNHSSQTVTVEVAPGNNLD
GIPMVSGSTTDTSTEMIVNVGLEKLSNGYTVVEYMRQTGGDYITWDPTGALYDGVVRVLD
ASNNVVKTLDISIPAGYTMLDTQIKALANGGFVVAWSQVDTLNWTDFSVHYAIYDNSGNL
QSSDTLASPGSGVTIAAQSSANGGDFAIAYQTMGNGTDQQEAISVFHYNGSGSSFTPGTQ
TLIGGNDASQNFGGVASPAVQLMKFQLTPGVLTALSDGSYVLASEVYDWIGTPGQSATTT
PIGAFIFKLDASGTLTSFDSGTTWQRVNWNDEQGSPTNVIAFDGGFAVFSQEYRTAAWEV
TLYNNNGTLITTNIQSNTVHNMGTQSYHAVDVGAMDKTLHDELAWIGNGSVAASATAYDN
GTDLVFVFPDGNGGLSQVTISKTTGDLTSDVTDTGITVPQGGQLYNPRIVSDGAGGYDIT
YSVLFDADTSDGSKSGYAVGGIYQIGLNAGPAPVLPTVTDAHIAITSTPGGADGMTYKVG
DTVTAVWDNSASGDANTSAVTSVTMDFSQFGGSTSATAYDDGTHGDAIAGDGKFTAQYTV
TAGALDHVAGRNVAVTVTAANHTSTTTADSTGLTVDSTAPVLTSSTPQDNGGSIATGANL
TLTFSEDVLAGSGHITLVNESDSSQNKVIDITDSSQVSISGNTVTIDPTTDLAAGANYHV
QIDSTALHDTAGNDYAGISSSTGLNFTTVSASTADPSIVVFDLTTGQSSDHNGRVFDANT
AYTIYIRVNSDSHSLVGLDSNEMWSGAQNLGIDDKIVLVGTGSEVKGDFGNAVSGMRGGN
SINWLAGSSISFSSYNVAGVDASGKFYRDGNNVDLWNGSWAANPNQDNGFAQAYLQAMPA
GVLTSQGLAMP
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
gtgatctacaccgccacggccaccgacaccgccgacatcagcggcggcgtcaccttctcg
ctgaaagcgggcagcgacgcgggcctgaccatcaacccggtcaccggcgcggtcaccctg
accggcaacccggactttgaaaacaaagccagctacagcttcaccgtggtcgccaccgat
gcggcagggaaccacagcagccaggcggtcacgcttgggatcaataacctcgacgaggtt
gccccgaccatcaccagcggtaccaccgccacggcgattaacgagaacagcggcgcaggc
cagatcgtttacaccgccacggccaccgacacggcggacatcagcggcggcgtcaccttc
tcgctccagccgggcagcgatgcgggcctgaccatcgatccggttaccggcgcggtcacc
ctgaccggcaacccggactttgagaacaaagccagctacagcttcaccgtggtggccacc
gatgcggcgggtaaccacagcagtcaggcggttacgctgggaattaacaacttcgatgaa
gtggcccccagcttcactaccggcaacagcagcgacagctatgccagtgccacggtgaac
gtggccgagaatatcgccgccagcaccgccatctatactgcgcaggcgaatgataatgac
gccgccgacggtggcgagcacgtcacttacagcctggctgacgaaaatggtgccgcagac
gcccagtatttcagcattgacgctgtaacgggggcggtcacctttaagtccagccccgac
tatgaaggtgcccacgcgcctgcatacacctttgcagtcgtcgctactgacgcagccggt
cacacaacccgccagaccgtcactgtcaatgtcaccgatgtggacgaaattgcccccaca
gtcacactcgatggaagctctacggggcctgtgatgttgaatacagcgcccctcaacacg
tatctcaacggttatgacactaccgcgctgggtgacggcaccttcctggtgacatgggca
agcaacaacaatggcaacctcgggatatatgcccagcgccttagcgcgcagggtgtggcg
atgggcgatccggtacagctcgcatcaggcgcaacctatacggtcatgagttcttcagac
agtatcctcagcgtcaccgcccttaatgatgcaggggcttacgccgtggcctggatcggc
aaggacggcaccagcagttacagcagcatctttgcgcaatcgttcaacgctgacggcact
ccactatccgcagccgcgcaacttgatggggttgcttctgcacatgacctcgccccgcaa
atcgcgacgcttgccgatggcggctatatcgtgagctggtccatcaacagcggtggcatt
tacgtgcagcgctttgacgacactggcgttgcagtaggcaacaccgtgccactggctgtg
tccggctcttctggcaacgccagcccgcaggtcaccgtgctggacaacggcagctatgtg
gtaacctggcagggctataccaccggcgactatcacatctacgtgcagcagttcgacgcc
acaggcaacggcaccacgcctgtgatgctggacgctacgacgggaaccagtaatagctac
gaaaacctgccacaaatcacggcgctggctaacggcggctatgtcgtcacctggtccggc
tataactacagcggttcgaactacaacaacagcacctatgtgcagcagttcgatgccaca
ggctccagggtcggcggcattgtcgttctggacggctcaagcaacgccaataacggtggc
agctatacctatccgtatgtcgcagccctggccgacggcggctacgccatcacctggatg
gaatacgacaacaccaacggctactacaattacaaggtttatgtacaacagttctctgct
ggcggcagcaaagtgggcgctaccgtgcaactggacgcaccgcacaacagtacgagtaac
gaccgtgatcaattcccgcgcatcacggcgctgggggatggtggctacgccgtcacctgg
atgagtattggcagctcgaattgggacatctatgtgcagaaattcaatgccagcggtgtc
gcggtaggcgatatggtgcgactggaagcttccggcggtgcgagtgacctctatccacag
gtcactgccgtcggtgcagacggtgaatacatggtgacatggtacggttacagccctggc
agcggcgtttctggttaccacctctacgtgcagaaatttaatgccgacggcagcacttac
gacaacctggtcgtactgaaccatgacggccaggccaccgtgcaaagcaccgaaaccggc
accgtctatctggtcaacgacaatgtcgtggtcagtcagctcagcgacattactggcgcc
gccagcgaccagtgggccagcacggccgtgatcgcaaataccagtgcaacgatctccgct
gccaaccttgctgacggcacctatcacgcctgggctgtcgatgcggcaggcaatctttct
gtcatttccggccgcagcgtggtggtggataacaccgtgcctgtctttaccagcgcgacc
acagccgccgacattaccgacagcaccgtcgctggcgataccgtgtataccgctgccgcc
accgacgcgcacggcgtcacctacagcctgaacgacacccagcacttccgcatcaacgcc
agcaccggcgtggtgacactgatttccagcccggaccaggccagcggtgcgcaattcatt
gtcaccgccaccgatgccgccggcaatcagaccacgcagaccgtcacctacaacgtcgtc
gatacgacgccgccgggcgtcatgctcgtcagcgacgcggacggcgtggagaacagtggt
gagatggtcatcgtgcagagctccgaggcgggcacggtatacctggtcagcgacagcgtg
acggtgacggatctgaacagcctcaacaatgctgccgacaacctggtgaatagcgttgcc
gtcgcggctaacgtcggcaccgtgctggccctgaacggcctggccgaagggacttaccac
gcgtatgccgtggatgcctccggcaatgtctccgctatctccggcagtagcgtgacagtg
gataacactgcgcccgtcatctccggtggcgcaacggctaacggcaccagcctcaccagc
ggtgcagcggcgggcacccaggtgtacgacgccaatgccagcgacgcccacgccatcatc
tacagcctggaccaggacagcctcgcctggttcgacattaatgccgccaccggtgtcgtc
acgctgaacagcgccgccgtcgccggcagctataacctggtcgtgaccgccaccgatgcg
gcgggcaaccacagcagccagaccgttaccgttgaggtcgcgccaggcaacaaccttgat
ggcatcccgatggtctcgggcagcaccaccgacacctccaccgagatgattgtcaacgtc
ggcctggagaagctgagtaacggttacacggtcgtcgagtacatgcggcagaccggcggt
gactatatcacctgggatccgaccggcgcgctgtacgacggcgtcgtcagggtgctggac
gcaagcaacaacgtcgtcaagaccctggacatcagcattcctgctggctacaccatgctg
gatacgcagatcaaggcgctggccaacggcggcttcgtcgtggcctggtcgcaggtggat
acccttaactggactgactttagcgtccactatgcgatctacgacaacagcggtaacctg
caatccagcgacacgctggcgtcgccaggctccggcgttaccattgcggcgcaaagcagc
gcgaatggcggtgatttcgcgatcgcctaccagacgatgggcaacgggaccgaccagcag
gaggccatctcggtcttccactacaacggcagcggatccagctttacaccgggaacgcag
accctgattggcggcaatgacgcgagtcaaaacttcggcggcgttgccagcccggccgtc
cagttgatgaaattccagctgacgccaggtgtgttgacggcgctgagcgatggcagctat
gtgctggcctccgaggtctacgactggattggcacgccgggtcagtcggcgacaaccacg
cctatcggtgccttcatcttcaagctcgacgccagcggcacgctgaccagtttcgacagc
ggcaccacctggcagcgcgttaactggaatgacgagcagggctcgccgactaacgtcatt
gctttcgacggtggttttgccgtctttagccaggaataccgcaccgcggcctgggaggtc
acgctttacaacaacaacggcacgctgatcaccaccaacatacagagcaacactgtccat
aacatggggacccagagctatcacgccgtggacgttggcgcgatggacaaaacgctccat
gacgagctggcgtggatcggcaatggctctgtggcggcatcggccacggcctacgacaac
ggcaccgatctggtgtttgtgttccctgacggtaacggcggcttgagccaggtcaccatc
tccaaaaccaccggcgatctgaccagtgacgtgaccgacaccggtatcacggtgcctcag
ggcgggcagttgtataacccgcggatcgtttccgatggcgcaggcggctatgacatcacc
tattctgtgctgtttgatgccgacaccagcgatggcagcaagagcggctacgcagtgggc
ggtatctaccagatcggcctgaatgccggtcctgctccggtgttaccgacagtgaccgat
gcccacatcgccatcacctctacgccaggtggtgcagatggcatgacctacaaggtcggc
gacaccgtcaccgccgtgtgggacaactcggccagcggcgacgccaataccagcgccgtg
accagcgttaccatggatttcagccagtttggcggcagcacctcggcgacggcttacgat
gacggcacccacggcgatgccatcgcaggtgacggtaaatttaccgctcaatacactgtc
accgccggtgcccttgaccatgtagccggtcgcaacgtcgccgtcacggtcactgcggcg
aatcacacgtctaccacgacggcggacagcaccggcctgacggtcgacagcactgcgcct
gtactcaccagcagtacgccgcaggacaatggcggcagcattgccacgggcgctaacctg
acgctgaccttcagcgaagatgtgctggccggcagcggccatatcaccctcgttaatgag
agcgacagtagtcagaacaaagtcatcgacatcaccgacagttcgcaggtcagcatcagc
ggcaacacggtgaccatcgacccgacaacggacctggcggcaggcgcaaactaccacgtc
cagatcgacagcactgcgctgcacgacacggcgggcaatgactatgccggtatcagttcg
tctactgggctgaatttcacgaccgtttccgcctcgaccgcggatccgtccatcgtggtg
ttcgacctgacaacgggccaaagctccgatcacaacgggcgcgtctttgatgccaatacc
gcgtacaccatctatatccgggtcaacagcgattcccattcgctggttgggctggatagc
aatgagatgtggtcgggcgcgcagaatcttggcatagacgacaagattgtgctggtgggc
acgggcagcgaagttaagggtgactttggcaacgcagtgtcggggatgcgcggtgggaat
tccattaattggctggcgggatcctctatttcgttttcctcttataacgtcgcaggcgtt
gacgcaagcggcaaattctatcgggatggtaataacgtggatctctggaacggctcctgg
gccgcgaacccgaatcaggacaacgggtttgctcaggcgtatctacaggcgatgcctgct
ggcgtcctcacctcgcaagggctggcgatgccatga
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