Leclercia sp. LSNIH3: C3F35_03940
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Entry
C3F35_03940 CDS
T05316
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
leh03009
]
C3F35_03940
Ribosome biogenesis [BR:
leh03009
]
Prokaryotic type
ribosomal protein modification factors
C3F35_03940
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Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AUY37988
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Position
799035..800795
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLTDLGFNIEEASWLNPVPHVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGDTVANGPFVHYPNEKWFPLTEDDELPEG
ILDDRLRAFYDLENQLTASMLIDLQSGNEDRGICALPFTRQSDEQTVYIPMNIVGNLYVS
NGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPADVLARYPGVVESIAKLEAE
GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGSISWDMFKQDADYPFVDWSFAGTTEEEFATLM
AIFTAENQEVYIADYEHLGVYACRILVPGMSDIYPVEDLWLANNSMGAHLRETLLALPES
AWEKEDYLNLITQLDDEGHDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAGGDLEQ
ALIWTEWTIEFNASVFSAERANYYRCLQTLLLLAQEEDREPLQYLNAFTRMYGADAVENA
SAALSGEAPFYGLQAVDSDLKAFPAHQSLLKAYEKLQKAKSAYWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttatccccggcaaagacgccgccctggaagattccatcgctcgcttc
cagcaaaaactgaccgacctgggctttaatatcgaagaagcctcctggctcaacccggtc
cctcatgtctggtctgtgcatattcgcgataaagagtgcgcgttgtgctttaccaacggc
aaaggtgccactaaaaaagcagcactggcctctgcactgggtgagtattttgagcgtctg
tccaccaactatttctttgccgatttctggctgggcgataccgtggcgaatggcccgttt
gttcactacccaaatgaaaaatggttcccgctgaccgaagacgacgaactgccagaaggg
atcctcgacgatcgcctgcgcgcgttttacgatctggaaaatcagctgaccgccagcatg
ctgatcgatctacagtcaggtaacgaagatcgcggtatctgcgccctgccgtttacccgt
cagtctgatgaacaaaccgtctatatcccgatgaacatcgtcggcaacctgtatgtctca
aacggaatgtccgccggtaacacccgcaacgaagcgcgcgttcagggcttgtccgaggtg
tttgagcgtcatattaaaaaccgcattatcgcagaatccatcagcctgccggagatcccg
gctgacgtgctggcccgctatccgggcgtggtggagtccattgccaaactggaagccgaa
ggtttcccaatctttgcctatgacggctctctgggcggtaagtacccggtgatctgcgtc
gtgctgttcaacccggcgaacggcacctgcttcgcctccttcggtgcacacccggacttc
ggcgtggcgctggagcgtaccgtcaccgaactgctgcagggccgtagcctgaaagatctg
gacgtgtttaccccgccgaccttcgatgatgaggaagtggctgagcacgccaacctggaa
acccacttcatcgactccagcggctcgatctcctgggatatgttcaagcaggacgcggat
tatccatttgttgactggagcttcgctggcaccacggaagaagagttcgctaccctgatg
gcgatcttcactgccgaaaaccaggaagtgtacatcgcggattacgagcacctgggcgtg
tacgcctgccgtattctggttccgggcatgtccgatatctatccggttgaagacctgtgg
ctggcgaacaacagcatgggcgcgcacctgcgcgaaaccctgctggccctgccggagagc
gcgtgggagaaagaggactatctgaaccttattacccaactggacgacgaaggccacgac
gactttacccgcgtgcgcgagctgctgggcctggcaacaggcaaagataacggctggtac
accctgcgtatcggtgagctgaaggcgatgctggcgctggcaggcggcgatcttgagcag
gcgctgatctggaccgagtggaccattgagttcaacgcctcggtcttcagcgcagaacgc
gcgaattactatcgttgtctgcagacgctgctgttgctggcgcaggaagaagatcgtgag
ccgctgcagtatctgaacgcctttacccgcatgtacggtgccgacgcggtagagaatgcc
agcgcagccctgagcggcgaagcgccattctacggcctgcaggcagtggatagtgatctg
aaagccttccctgctcaccagtcgttgctgaaggcctatgagaaattgcagaaggccaaa
agcgcttactgggctaaataa
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