Leclercia sp. LSNIH3: C3F35_04370
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Entry
C3F35_04370 CDS
T05316
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00900
Terpenoid backbone biosynthesis
leh01100
Metabolic pathways
leh01110
Biosynthesis of secondary metabolites
Module
leh_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C3F35_04370
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
leh01006
]
C3F35_04370
Enzymes [BR:
leh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
C3F35_04370
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
C3F35_04370
2.5.1.29 geranylgeranyl diphosphate synthase
C3F35_04370
Prenyltransferases [BR:
leh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
C3F35_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AUY38068
LinkDB
All DBs
Position
complement(891903..892823)
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AA seq
306 aa
AA seq
DB search
MTLSHEDDVKMLLSAFERRLEQLLPEGEQEGQVYAAMREATLVAGKRMRPLLLLLAATDM
GYKTEQTGLLDLACAIEMVHVASLILDDMPCMDNATLRRGRPTVHYQYGENVAILAAVAL
LSHAFCVISRAPALTPEAKARAIAELSASVGHMGLVQGQFRDLNESRQSRNADEILLTNE
LKTSSLFNATLQLAAIAADAPPQVSERLRFFARDLGQAFQLIDDLTDGSSATGKDPHQDK
DKSTLVAVLGAESVFLRLREHVRSADQHIASACQPGNTARYYVHVWFEKQLTLISQSLSL
SLSECQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacccttagtcatgaagatgatgtcaaaatgctgctgtctgcgtttgaacgacgtctg
gaacaactcttgcccgagggcgagcaggaaggccaggtctatgcggccatgcgcgaagca
acgcttgtcgccggcaagcgaatgcgccctctgttgctgctgctggccgcgacggatatg
ggctataaaactgagcagacaggcctgctggaccttgcctgcgccattgagatggtccat
gtcgcctccctgattctggatgacatgccctgcatggacaatgccaccctcagacgtgga
cgtcctaccgttcattatcagtacggcgaaaacgtcgcgatactggcggcggtggcgttg
ctgagtcatgcgttttgcgttatctcacgcgcgcctgcgcttacgcctgaggcaaaagcg
cgggcgattgctgagctgtcggcatcggtggggcatatggggctggtgcaggggcaattt
cgcgatctgaacgagtcccggcagagccggaatgcggatgagatcctgctgaccaacgag
ctgaaaaccagcagcctgttcaacgccaccctgcaactggcggccattgccgctgatgca
ccgcctcaggtcagtgaacgtctgcgctttttcgcccgcgatctgggccaggccttccag
ctgattgatgacctgacggacggctccagtgccaccggtaaagatccgcatcaggacaaa
gataaatcgacgctggtcgcggtgctgggggcagaaagcgtcttcctgcggctgcgcgaa
cacgtgcgcagcgccgatcagcatattgccagcgcctgccagccgggaaataccgcccgg
tactatgttcacgtctggtttgaaaaacagctgacgcttatcagtcagagcctgtcgtta
tccctgtcggagtgtcaatga
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