Leclercia sp. LSNIH3: C3F35_05105
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Entry
C3F35_05105 CDS
T05316
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00020
Citrate cycle (TCA cycle)
leh00190
Oxidative phosphorylation
leh00650
Butanoate metabolism
leh00720
Other carbon fixation pathways
leh01100
Metabolic pathways
leh01110
Biosynthesis of secondary metabolites
leh01120
Microbial metabolism in diverse environments
leh01200
Carbon metabolism
Module
leh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
leh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
leh_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C3F35_05105
00650 Butanoate metabolism
C3F35_05105
09102 Energy metabolism
00190 Oxidative phosphorylation
C3F35_05105
00720 Other carbon fixation pathways
C3F35_05105
Enzymes [BR:
leh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
C3F35_05105
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AUY38201
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Position
complement(1048570..1050336)
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HDDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFG
GQSKDFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNEDGAIVGC
TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQ
ESIAEQGPLRDATDANIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAM
AKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH
SRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccagtcagagaatttgatgctgtagtgattggagccggtggcgcaggtatg
cgcgcggcgctgcaaatttcccagagcggccagacctgtgcgctgctctctaaagtcttc
ccgacccgttcccataccgtatctgcgcagggtggcatcaccgtcgcgctcggtaatacc
catgatgataactgggaatggcatatgtacgacacggtgaaaggctccgattacatcggt
gaccaggacgccattgaatatatgtgtaaaaccggcccggaagcgattctggagctggac
catatgggtctgcctttctcccgcctggagaacggcaccatctatcaacgtccgtttggc
ggccagtcgaaggacttcggcggcgagcaggcggcccgtaccgcagcagcggccgaccgt
accggtcacgcgcttctgcataccctgtatcagcagaacctgaagaacaaaaccaccatc
ttctccgagtggtatgccctggatctggtgaaaaacgaagatggcgcgatcgtagggtgt
accgcgctgtgtatcgaaaccggtgaagtcgtctacttcaaagcccgtgcaaccgtgctg
gcaaccggcggtgcaggccgtatttaccagtccaccactaacgcccatatcaacaccggt
gacggcgtcggtatggcgatccgcgctggcgtgccggtgcaggatatggagatgtggcag
ttccacccaaccggtatcgccggtgcgggcgtgctggttacagaaggctgccgcggtgaa
ggtggctacctgctgaacaaacatggcgagcgcttcatggagcgttatgccccgaatgcg
aaagatctggcgggtcgtgacgtggtggcgcgttccatcatgatcgaaatccgtgaaggt
cgtggctgcgacggtccgtgggggccgcacgcgaagctgaaacttgaccacctgggtaaa
gaggttctggaatcacgtctgccaggcatcctggagctgtcccgtacctttgctcacgtc
gacccggttaaagagccgatcccggtaatcccaacctgccactacatgatgggcggtatt
ccgaccaaagtgaccggccaggcgctgaccgtgaacgagcagggcgaagacgtggtgatc
ccgggcctgttcgcggtaggcgaaattgcctgcgtatccgtacacggcgccaaccgtctg
ggcggcaactcgcttctcgacctggtggtgtttggtcgtgcggtgggtctgcatctgcaa
gagtctattgctgagcaggggccgctgcgtgatgccaccgacgcgaatatcgacgcctct
ctggaacgtctgaatcgctggaacggtaaccgcaacggcgaagatccggtagagattcgt
aaggcgctgcaggagtgcatgcagcacaacttctcggtattccgtgaaggcgatgcgatg
gcgaaagggcttgagcagctgaaagcgatccgcgagcgtctgaaaaatgcccgtctggac
gatacttccagcgagttcaacacccagcgcgtagagtgtctggagctggataacctgatg
gaaaccgcttacgcgactgcggtctctgcaaacttccgtaccgaaagccgtggcgcgcat
agccgcttcgacttcccggatcgtgacgacgaaaactggctgtgccattccctgtacctg
ccagagtcggaatccatgacacgtcgtagcgtcaatatggaaccgaaactgcgtccggcg
ttcccgccgaagattcgtacttattaa
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