Leclercia sp. LSNIH3: C3F35_05170
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Entry
C3F35_05170 CDS
T05316
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_05170
Enzymes [BR:
leh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C3F35_05170
DNA repair and recombination proteins [BR:
leh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C3F35_05170
Prokaryotic type
C3F35_05170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DPRP
SepSecS
Motif
Other DBs
NCBI-ProteinID:
AUY38211
LinkDB
All DBs
Position
complement(1059392..1060804)
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AA seq
470 aa
AA seq
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MATHLVWFRADLRIHDNLALAAACRNKNARVLALFIATPQQWQQHAMAPRQAAFLHAHLN
GLQQQLADKGIPLLYAQVDDFAAQAEKVAQICAEHDVTQLFYNYQYELNEQQRDRQLERA
LEDVTCQGFDDSVILPPGSVMTGNHEMYKVFTPFKNAWLRRLKEGLPECAAAPAGREGEK
VTLETLEFDYPQQAFDADLFPASEKEAIARLRQFCQQSAGDYETQRDFPAIEGTSRLSAC
LTLGVLSPRQCLHRLLAEQPQALEGGPGSVWLSELIWREFYRHLMTYHPDLCKYQPFIRW
TDNVQWQADETQLRAWQYGQTGYPIVDAAMRQMNETGWMHNRLRMITASFLVKDLLIDWR
AGERYFISQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGQKFDSDGVFIRRWLP
ELASVPDKAIHDPWTWADKQGITLDYPRPVVDHKQARVATLAAYEAARKA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccacccatctggtctggtttcgcgccgatctgcgcatccacgacaacctggcgctt
gccgccgcctgtcgcaacaaaaatgcccgcgtgctggcgcttttcatcgctacgccgcaa
cagtggcagcagcacgcgatggcaccgcgccaggccgcgtttcttcacgcccatctcaac
ggcttacagcagcagctggccgataaaggcattccgctgctgtacgctcaggtcgatgat
tttgcggcacaagcagagaaagtggcgcagatttgcgccgagcatgacgtcacccaactt
ttttataactaccagtacgaactgaacgagcaacagcgcgatcgccagctggagcgcgcg
ctggaggacgtaacgtgtcagggatttgatgacagcgttatcctgcctcccggcagcgtc
atgaccggcaatcacgagatgtacaaagtgtttacgcccttcaaaaacgcctggctgcgg
cgactgaaagaggggctacccgagtgtgcggcggcacctgccgggcgcgagggcgaaaaa
gttacgctggagacgctggagttcgactacccgcagcaggcgttcgatgcagacctgttt
ccggcgagcgagaaagaggcgattgcccggctgcgccagttctgccagcagagcgcgggc
gactacgagacacagcgcgatttcccggctatcgaaggcaccagccgtctctccgcctgt
ctgacactgggggtgctttccccccgccagtgcctgcacagattgctcgccgagcaaccc
caggcgctggaaggcggcccgggctcggtatggctaagtgaactgatctggcgagagttt
tatcgccacctgatgacgtatcaccctgatttgtgtaaatatcaacccttcatacgttgg
acggataacgtccagtggcaggcagacgagactcagttgcgggcctggcaatatggacag
accggctaccccatcgtcgatgccgccatgcgccagatgaatgaaacaggctggatgcat
aaccgcctgcgtatgattaccgccagttttctggtgaaagatctgctgatcgactggcga
gccggggaacgttactttatttcgcagttgattgatggcgacctggccgccaacaacggc
ggctggcagtgggcggcgtcaaccggcaccgacgcggccccttattttcgtatttttaac
ccgacaacccaggggcagaagttcgattccgacggcgtgtttatccgccgctggctgccg
gagctggcctccgtgccggacaaggccatccatgacccctggacctgggcagacaagcag
gggatcaccctcgattatccgcgcccggttgtcgatcataaacaggcgcgcgtagccacg
ctggcagcgtatgaagccgcccgaaaagcgtaa
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