Leclercia sp. LSNIH3: C3F35_09505
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Entry
C3F35_09505 CDS
T05316
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00230
Purine metabolism
leh00240
Pyrimidine metabolism
leh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
C3F35_09505 (cpdB)
00240 Pyrimidine metabolism
C3F35_09505 (cpdB)
Enzymes [BR:
leh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
C3F35_09505 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
C3F35_09505 (cpdB)
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Paralog
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GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
DUF7436
Motif
Other DBs
NCBI-ProteinID:
AUY38997
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All DBs
Position
1966059..1968002
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AA seq
647 aa
AA seq
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MIKFSATLLATLIAASVQAATVDLRILETTDLHSNMMDFDYYKDAPTEKFGLVRTASLIN
AARSEVKNSVLVDNGDLIQGSPLGDYMAAKGLKKGDVHPVYKALNTLDYAVGNLGNHEFN
YGLDYLHMALSGAKFPYVNANIIDVKTNKPLFTPYLIKETTVVDQDGKTQTLKIGYIGFV
PPQIMTWDKANLSGKVTVNDITETARKYVPEMREKGADLVVVVAHSGLSADPYQAMAENS
VYYLSEVKGVDAILFGHAHAVFPGKDFASIKGADIAKGTLNGVPAVMPGMWGDHLGVVDL
VLNNDGGKWQVTQSKAEARPIYDLAAKKALVGEDKNIVEVLKHDHDATREFVSKPIGKSS
DNMYSYLSLVQDDPTVQVVNMAQKAYVERYIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS
YVEVEKGQLTFRNAADLYLYPNTLVVVKATGQEVKEWLECSAGQFNQIDTNSPQPQSLIN
WDGFRTYNFDVIDGVEYQIDVSQPAKYDGECQVVNAQAERIKNLTFNGKPIDPKATFLVA
TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIGEQSKKSGEIHPAADNNWRLAPIAS
KVKLDVRFETSPSEKAAAFIKEKAQYPMQQVATDDIGFAIYQVDLSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagcgcaacgctcctggcgacgctgattgccgcgagcgtacaggcagcg
acagttgatctccgcattctggaaacgaccgacctgcacagcaatatgatggacttcgac
tactacaaagatgcaccgacggaaaaatttggcctggttcgcactgccagcctgattaat
gccgcccgtagcgaagtgaaaaacagcgtgctggtcgataacggggacttaattcagggt
agtccgcttggcgattacatggctgcgaaaggtctgaaaaagggcgatgttcatccggtc
tataaggcgctgaacaccctggactacgcggtgggtaacctcggcaaccacgagtttaac
tacgggctggattatctgcatatggcgctctccggggccaaattcccgtacgttaacgcc
aatatcatcgacgttaaaaccaataagccgctgttcaccccttatctgatcaaagagacg
accgtggtcgatcaggacgggaaaacgcagaccctgaagattggctatatcggttttgta
ccgccgcaaatcatgacctgggataaggccaacctgagcggcaaagtgacggttaacgac
attaccgaaactgcacgtaagtatgtgccggagatgcgtgagaaaggtgccgatctggtg
gtcgtcgtggcgcactcgggtctgtctgccgatccgtatcaggcgatggcggaaaactcc
gtctactacctcagcgaagtgaaaggcgttgatgccattctcttcggccacgcgcacgca
gtgttcccgggcaaagatttcgccagcattaaaggggctgatattgccaaaggaacgctg
aacggtgtacctgctgtcatgccgggcatgtggggggatcacctcggggtggtcgatctg
gtgctgaataatgacggcggcaaatggcaggtgacgcagtcgaaggccgaagcgcgaccg
atttacgatctggccgccaaaaaagcgctggtgggtgaggataaaaacatcgtcgaggtg
ctgaaacacgatcacgacgctacccgtgagtttgtcagcaaaccgatcggtaaatcctcg
gacaacatgtacagctacctgtcgctggtgcaggacgatcccaccgtacaggtggtgaac
atggcgcagaaagcctacgtggagcgctatattcagggcgacccggacctggcgaaactg
ccagtactctctgctgccgcgccatttaaagtgggcggacgtaagaacgatccggccagc
tacgtcgaagtggaaaaaggccagctgaccttccgtaacgccgccgatctctatctctat
ccgaacaccctggtagtggtgaaagcgaccggccaggaggtgaaagagtggctggagtgc
tctgctggacaattcaaccagatcgatacgaacagcccccaaccgcagtcgcttattaac
tgggacgggttccgtacctataacttcgacgtaatcgacggcgtggagtatcagattgat
gtctcgcagccggcgaaatatgacggcgagtgccaggtggtgaacgcccaggcggagcgt
atcaagaacctgacctttaacggtaagccaatcgaccctaaagcgaccttcctggtggcg
accaataactatcgcgcctacggcggtaagtttgccggaaccggcgacagccatatcgcc
ttcgcttcaccggatgagaaccgctcggtgctggctgcgtggatcggtgagcagtcgaaa
aagagtggtgaaattcatccggcagcggacaacaactggcgtctggcaccgatcgccagc
aaggtgaagctggatgttcgctttgagacgtcgccatcagaaaaagcggcggcgtttatc
aaagagaaagcgcagtatccgatgcagcaggtcgcaaccgatgacattgggtttgcgatt
tatcaggtggatttaagcaaataa
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