Leclercia sp. LSNIH3: C3F35_11740
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Entry
C3F35_11740 CDS
T05316
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00040
Pentose and glucuronate interconversions
leh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C3F35_11740
Enzymes [BR:
leh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
C3F35_11740
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
AUY39405
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Position
2424447..2426540
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AA seq
697 aa
AA seq
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MKSKIPLALMMCSAFSATANDQPHIWKAIAFGQSTDVNFSSNVLPEKIGVNDVTIDGKKL
LPQESADLAKAITLESRGGKIANSHDGLTFFYTELPTDENFVLQANIRVDQFGPENGAKP
AAQEGAGLLVRDVLGNPRQQPLKTGYEEFPAASNLVMNAIMTQDKKDHQRVKMQAITREG
IRHPWGDAGAAIKKQSYKEEVDLSQTPEFRLKLQRTDDGFITAWAPLGSDNWVSKSVPRA
DLISVQNQEHYYVGFFASRNAKITVTQASLTTTPAHTVTSTPWQAEPLPLMVQLASGNVS
ASGDYLLQARANEDGVFSVRQNEVVIGNEKAVKAGEMYTLPTRLEQTSTFTVAFTPSQGT
PVNQQLTVERVANRNTALLYAAPDGKADAKGTLDAPLDLATAIALLAPGGKLVLKSGDYP
RSEIPLSASGSRDKIKTLQAEGKVVIHGLLLDASYWHIEGIDVTDKSLRVQGSHNLIARV
TAYRNDDTGIQISSPEKIGRPLWASYNRVVDSESYANEDPGKINADGFAVKMRVGEGNRL
ENCYAHDNVDDGFDLFNKIEDGANGVVVIENSVASNNTSNGFKLGGEGQPVAHQIRNSKA
TGNHLDGFTDNFNPGKLVVENNLAVDNQRFNYIFRPSPYGDVTTQGTFTGNLSIRNQPGE
YDDAVVGNIDNTNYFIVKGKSVNTDGKVLDKTQVKAL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaaatacctctggccctgatgatgtgtagcgccttttccgcaacggctaac
gaccagcctcatatctggaaagccattgcatttgggcaatcaaccgatgtgaatttttct
tccaacgtgctgcccgaaaaaattggcgtcaatgatgtcactatcgacggcaaaaaactt
ctgccgcaggagagtgccgatctggcaaaagcgattacgctggagagtcgtggcggaaaa
atagctaactcccacgacggattaacctttttctataccgagctaccgacagacgagaat
ttcgttttacaggccaacatccgggtcgatcagtttggacctgagaatggtgcaaaacct
gctgcacaggaaggcgccgggctgctggtgcgcgatgttctcggcaacccgcgtcaacag
ccgctgaaaaccggttatgaagagttcccggcggcgtcgaacctggtgatgaacgctatc
atgacccaggataaaaaagatcatcagcgagtgaaaatgcaggccatcacccgcgagggg
attcgccatccgtggggcgatgccggggctgcgattaaaaaacagagttataaagaagag
gtggatctgagccagacccccgagtttcgcctcaaactccagcgaacggacgacgggttt
attaccgcgtgggcaccgctgggcagcgacaactgggtgagcaagagcgtgccacgcgcc
gatctgatttcggtgcaaaaccaggagcactattacgtcggcttcttcgcatcacgtaat
gccaaaatcacggtcacccaggcctcgctgacgacgacccctgcccataccgtgacttca
acgccgtggcaggcagagccgctgccgctcatggtgcagctggcttccggtaacgtcagc
gcttccggggattacctgttgcaggcgcgcgccaatgaagacggggtattcagcgtccgg
caaaacgaagtggtgatcggtaatgagaaagcggtaaaagcgggagagatgtacaccctg
cccactcgtcttgagcagaccagcacctttacggtggcctttaccccctctcagggcacg
ccggtaaatcagcagcttaccgtggaacgcgtcgcgaacaggaatacggcgcttctctat
gccgcaccagacggcaaagcagatgcgaaaggcacactcgatgcgccgctggatctcgcc
actgccatcgcgctgctggcccctggcggtaagctggtgctgaaaagcggcgattaccct
cgcagcgagatcccactctctgccagcggcagccgcgataagatcaaaacgctgcaggct
gagggtaaagtggtgatccatggtctgctgctcgacgccagttactggcacatcgaggga
atcgatgtcacggacaaaagcctgcgggtccagggtagccataacctgatcgcgcgcgtc
acggcgtatcgcaatgacgacacaggcatccagatatcatcccctgagaagatcggtcgc
ccgttgtgggcaagctataaccgggtggtggattctgaatcatatgccaatgaagatccc
ggcaagattaacgccgatggctttgcggtgaagatgcgggtcggggaaggtaaccggctg
gagaattgctatgcccatgacaacgtcgacgacggttttgatctgttcaataagattgaa
gatggggcaaacggcgtggtggtgattgagaactcggtcgccagcaacaataccagtaac
ggcttcaagcttggcggggaagggcagccagtggcacaccagatccgcaacagcaaagcg
acgggcaatcatctggacggcttcaccgataactttaacccgggcaagctggtggtggag
aacaaccttgcggtggataaccagcgcttcaactatatcttccgcccgagtccttacgga
gacgtaacaacacaggggacgtttaccggcaacctgtcgatccgtaatcagccaggtgag
tatgatgatgcggtcgtgggaaacattgataacacgaattactttatcgtgaagggtaaa
agcgtgaatacagacgggaaggtgttagacaagacccaggttaaggccctgtaa
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