Leclercia sp. LSNIH3: C3F35_12020
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Entry
C3F35_12020 CDS
T05316
Name
(GenBank) DeoR/GlpR transcriptional regulator
KO
K27243
DeoR family transcriptional regulator, sulfoquinovose operon repressor
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leh03000
]
C3F35_12020
Transcription factors [BR:
leh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
C3F35_12020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR
HTH_Crp_2
MarR_2
GntR
HTH_20
HTH_Mga
HTH_24
HTH_29
Fe_dep_repress
HTH_5
Rrf2
TrmB
HTH_PafC
HTH_17
RPA_C
DDRGK
DprA_WH
Sugar-bind
MerR
HTH_12
CoA_trans
TFIIE_alpha
HTH_36
Sigma70_r4
SgrR_N
HTH_28
Xre-like-HTH
CggR_N
YfeC-like
Motif
Other DBs
NCBI-ProteinID:
AUY39452
LinkDB
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Position
2485722..2486510
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AA seq
262 aa
AA seq
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MSLTELTGNPRHDQLLTLIADRGYMNIDELANLLDVSTQTVRRDIRKLSDQGLITRHHGG
AGRASSVVNTAFEQREVSLTEEKRAIAEAIADYIPDGSTLFITIGTTVEHVARALLNHNH
LRIITNSLRVAHILYKNPRFEVMVPGGTLRPHNGGIIGPAATAFVSGFRADYLVTSVGAI
ESDGALMEFDVNEASVAKTMMAHSRHILLAADHTKYHASAAIEVGNVAQATALFTDKLPG
SALQGHLKSGKVEVVEVNPGDE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaccgaactgaccggcaacccgcgccacgatcagctgctaacgctaattgcc
gatcgtggttatatgaacattgatgaactggcgaacctgctggatgtctccacgcaaacg
gtgcgtcgggatatccgcaaactgagcgaccaggggctgataacacgtcatcatggtggt
gcgggcagggcatccagcgtggtcaacacggcttttgagcagcgcgaagtctctctgacc
gaagagaagcgagcgattgccgaggccattgcggactatattcctgatggctcaaccctg
tttatcaccattggtacgaccgtggagcatgtggcccgtgccctgcttaaccataatcat
ctgcgtattatcaccaacagcctgcgggtggcgcatattctctacaaaaacccgcgcttt
gaggtgatggtccccggcggtacgctgcgtccgcacaacggcggcatcatcggcccggcg
gccacggcgtttgtgtcgggtttccgtgctgattacctggtgaccagcgtcggggcgatt
gaatccgacggtgcgctgatggaatttgatgttaacgaagccagcgtggcgaagaccatg
atggcgcactcccggcacattttactggcggccgatcatacgaaataccacgcttccgcc
gcgatcgaagtcggtaacgtggcgcaggctacggcgctcttcaccgataaactccccggc
tctgccctgcaaggtcatctgaaatccggcaaggttgaggttgttgaagtcaatccgggc
gacgaataa
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