Leclercia sp. LSNIH3: C3F35_12190
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Entry
C3F35_12190 CDS
T05316
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C3F35_12190 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leh02000
]
C3F35_12190 (rhaS)
Transporters [BR:
leh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
C3F35_12190 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
AGT
CC142_N
Motif
Other DBs
NCBI-ProteinID:
AUY39482
LinkDB
All DBs
Position
complement(2524665..2525651)
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AA seq
328 aa
AA seq
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MKIKTSLILTVAALALSGSALAEVKIALVAKSLGNGFFEAANVGAQEAAKELGDVKVIYT
GPTTTTAEAQIEVLNGLIAQGVDAIAISANDPDAVVPVLKKAMQRGIKVVSWDSGVAKAG
RQIHLNPSNNALIGETNVKLAAEALKALNVEKGDVAVLSATPTSTNQNTWIAEMKKVLPQ
YPSVNLVTVAYGDDLSDKSYREAVGLLKTYPDLKVIVSPSSVGIVAAAQAVKDQGKIGKV
YVTGLGLPSEMAGAVKSGASKSFAIWNPIDLGYAATYLADDLVKGTATKEEASMGKLGKV
KLDADGSGAMAEPFVYDASNIDKFSKIF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaagacaagcttgatcctcaccgttgccgccctggcgttgtccggttctgct
ttagctgaagttaaaatcgccctggtggcgaaatcgttaggtaatggcttcttcgaagcg
gcaaacgtgggtgcccaggaggcagccaaagagttaggtgatgttaaagtgatctatacc
ggcccaaccaccaccaccgccgaagcccagatcgaagtgctgaacgggttgatcgcgcag
ggggtggatgcgatcgccatctccgccaacgatcctgatgccgtggtgccggtgctgaaa
aaagcgatgcagcgcgggatcaaagtggtgtcgtgggactccggcgtggcgaaagccggg
cgccagatccaccttaacccttccaataacgcgctgattggcgagactaacgtcaagctg
gcggccgaagcgctgaaagcgctgaacgtggaaaaaggcgatgtggcggtattgagcgct
acgccgacctccaccaaccagaacacctggattgccgagatgaaaaaggtgctgccacag
tacccgtccgtcaatctggtgaccgtggcctatggcgacgatctgtcggataagagctac
cgcgaagcggtcggcctgctgaaaacctacccggatctgaaagtgatcgtctctccgtcg
tcggtcggcattgtggcggcagcgcaggcggtgaaagatcagggcaagatcggcaaagtg
tacgtgaccggcctcggcctgccatctgaaatggcgggcgcggtgaaatccggtgccagt
aagagcttcgccatctggaacccgatcgacctcggttatgccgcgacttacttagcggat
gatctggtgaaaggcacggcgaccaaagaagaagccagcatgggcaaactgggcaaagtg
aagctggatgccgacggcagcggcgcaatggctgagccgtttgtttacgatgccagcaac
attgataagttctcaaaaatcttctga
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