Leclercia sp. LSNIH3: C3F35_12770
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Entry
C3F35_12770 CDS
T05316
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh03420
Nucleotide excision repair
leh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3F35_12770
03430 Mismatch repair
C3F35_12770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_12770
Enzymes [BR:
leh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3F35_12770
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3F35_12770
MMR (mismatch excision repair)
Other MMR factors
C3F35_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
PhoH
DMP19
Motif
Other DBs
NCBI-ProteinID:
AUY39582
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All DBs
Position
2644954..2647116
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAATRTNMLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSFGNPIEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDS
SKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTEGIDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEKCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFLELIEALAHETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEECVEEVRLRASISRPVSHQRLG
APIAENDSGFKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgacgcggttgccgcg
acgcgcaccaatatgctggtgctggcaggggcgggcagtggtaagacacgtgtgctggta
caccgtatcgcctggctgcaaagcgtggagaactgctcgccgtactccattatggcggtg
accttcaccaacaaagcggcggcagagatgcgccaccgtatcgcccagctgatgggcacc
agccagggcggcatgtgggtcggcaccttccacgggctggcacaccgtctgctgcgtgcg
caccatctggacgccaatctgcctcaggactttcagatcctcgacagcgaagatcagctg
cgcctgcttaagcgcctgatcaaggccatgaacctcgacgagaaacagtggccgccgcgc
caggccatgtggtacatcaacagccaaaaagacgaagggctgcgtccacatcatatccag
agttttggcaaccccattgaacagacctggcagaaggtttatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggatttcgccgagctgctgctgcgcgcccacgagctgtgg
ctcaacaagccgcacatcctgcagcactaccgcgaacgcttcaccaacatcctggtggac
gaattccaggatactaacaacattcagtacgcgtggatccgcctgctggcgggcgactcc
agcaaggtgatgatcgtcggtgacgatgatcagtcgatctacggctggcgcggcgcgcag
gtggagaacatccagcgtttccttaaggacttccctggcgcagagaccatccgcctcgag
cagaactaccgctctaccaacaacattctgagcgcggccaacgccctgattgaaaacaac
aatgggcgtctgggtaaaaagctctggaccgagggcatcgacggcgagcctatctcgctt
tactgcgcgtttaacgagctggacgaagcccgcttcgtggttaaccggatcaaaacctgg
caggacaacggcggcgcgctggagaaatgcgccattctctatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgctgttgcaggccagcatgccgtaccgcatctatggcgggatg
cgcttctttgagcgtcaggaaattaaagacgcgctctcttatctgcgcctgattgccaac
cgtaacgatgacgcggcctttgagcgcgtggttaacaccccaacgcgcggcattggcgat
cgcaccctggacgtggtgcgtcagacctcccgcgatcgccagctgaccctgtggcaggcg
tgtcgcgagctgctgcaggagaaggctcttgccggacgtgcggccagcgcactgcaacgc
ttcctggagctgatcgaagccctggcacatgaaactgccgatatgccgctgcacgttcag
accgaccgggtgatcaaagactccggcctgcgcatgatgtacgagcaggagaagggcgag
aagggccagacccgtatcgagaacttagaggagctggtgacggccacgcgccagttcagc
tacaacgaagaagacgaagatctgatgccgctgcaggcattcctgtcccatgctgcgctg
gaagcaggcgaagggcaggcggatacctggcaggacgcggttcagctgatgaccctgcat
tcggccaaagggctggagttcccgcaggtgtttatcgtcggcatggaagaggggatgttc
ccgagccagatgtcgctggatgagggcgggcgtctcgaagaggagcgccgcctggcctat
gtgggcgtgacccgcgcaatgcaaaagctgaccctgacctatgcggaaacccgtcgtctg
tacggcaaagaggtttaccatcggccgtcgcgttttgtcggtgaactgcctgaagagtgc
gtggaagaggtccgtctgcgggccagcatcagccgtccggttagccatcagcgcctgggt
gcgccgattgctgaaaacgacagcggattcaagctcggccagcgtgtgcgccacgccaaa
tttggtgagggcacgattgtgaatctggaaggcagcggggagcacagccgtctgcaggtg
gcgttccagggacaggggatcaaatggctggtggccgcttacgcccggctggaagcagtg
taa
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