Leclercia sp. LSNIH3: C3F35_12915
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Entry
C3F35_12915 CDS
T05316
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00071
Fatty acid degradation
leh00280
Valine, leucine and isoleucine degradation
leh00310
Lysine degradation
leh00362
Benzoate degradation
leh00380
Tryptophan metabolism
leh00410
beta-Alanine metabolism
leh00640
Propanoate metabolism
leh00650
Butanoate metabolism
leh00907
Pinene, camphor and geraniol degradation
leh00930
Caprolactam degradation
leh01100
Metabolic pathways
leh01110
Biosynthesis of secondary metabolites
leh01120
Microbial metabolism in diverse environments
leh01200
Carbon metabolism
leh01212
Fatty acid metabolism
Module
leh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C3F35_12915 (fadB)
00650 Butanoate metabolism
C3F35_12915 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
C3F35_12915 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C3F35_12915 (fadB)
00310 Lysine degradation
C3F35_12915 (fadB)
00380 Tryptophan metabolism
C3F35_12915 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C3F35_12915 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C3F35_12915 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C3F35_12915 (fadB)
00930 Caprolactam degradation
C3F35_12915 (fadB)
Enzymes [BR:
leh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C3F35_12915 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C3F35_12915 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C3F35_12915 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C3F35_12915 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AUY39611
LinkDB
All DBs
Position
complement(2674207..2676396)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYVDWLEGGIAELVFDAPGSVNKLDTATVASLGHALDVLEKEADLKGLLLRSE
KAAFIVGADITEFLSLFLVPQEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQALK
LGLVDGVVKPEKLHEGALAILRQAINGDLDWKAKRQPKLEPLHLSKIEATMSFTIAKGMV
MQTAGKHYPAPITAVKTIESAARLGRDDALKLENQSFVPLAHTNEARALVGIFLNDQFVK
GKAKQLTKNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINEKSLTLGMTEAAKLL
NKQLERGKIDGLKLSGVISTIHPTLEYSGFDRVDVVVEAVVENPKVKKAVLAETEDKVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDETLAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMQKDYRDAIDALFESNRYGQKNGLGFWRYKEDSKGKP
KKEEDAAVDSLLAEVSQAKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSARYLDMTQQYEHLGALYHAPEGLRTKAHHNEAYYPPVEPA
RPVGALKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaccctgtacgtagactggctggaaggtggcattgccgaactg
gtgttcgacgcccccggctcagtgaataaactggacaccgcaaccgtggccagtcttggc
catgcgctggacgttctggaaaaagaggccgacttaaaaggtctgttgctgcgttctgag
aaagcggcatttatcgtcggcgcagacatcaccgaattcctctcgctgttcctggtgcca
caagagcaactgagccagtggctgcattttgccaacagcgtctttaaccgtctggaagat
cttccggtcccgactatctctgcggtcaacggctatgcactgggcggcggctgcgaatgc
gtgctggcgaccgattaccgtctggccaccccggatctgcgtatcggcctgcctgaaacc
aaactgggcattatgccgggctttggcggctcggtccgtttgccgcgcctgctgggtgcc
gacagcgccctggagattattgctgccggtaaagatgtcggtgccgatcaggcgttaaaa
ctcggtctggtggatggcgtcgttaagcctgaaaaactgcatgaaggtgcgctcgccatt
ctgcgccaggcgatcaacggcgacctcgactggaaagcaaaacgccagccgaaactggag
ccgctgcacttaagtaaaattgaagccaccatgagtttcacgattgccaaaggcatggtg
atgcaaaccgcgggtaaacactaccctgcgccgattaccgcagtgaaaaccatcgaatct
gcggcacgcctgggccgtgacgacgcactgaaattagaaaaccaaagtttcgtccccctg
gcacataccaacgaagcccgcgcgctggtcggtattttcctcaacgatcagttcgtgaag
ggcaaagcgaagcagctcaccaaaaatgtcgagacgccaaaacaggcggcggtactgggc
gcaggcattatgggcggcggcatcgcttaccagtcggcctggaaaggcgtgccggtggtc
atgaaagatatcaacgagaagtcgctgaccctgggcatgactgaagcggccaagctgctg
aacaaacagctcgaacgcggcaagatcgacggtctgaagctctccggggtgatctctact
atccacccgacgctggaatacagcggtttcgatcgtgtggatgtggtggtcgaagcggta
gtcgaaaacccgaaggtgaaaaaagccgtactggcagagacagaagacaaggtgcgcccg
gataccgtgctggcgtccaacacttccaccattccaatcagcgaactggccagtgtcctg
aagcgcccggaaaacttctgcggaatgcacttctttaacccggtgcatcgcatgccgctg
gttgaagtcattcgcggcgagaaaacgtctgacgaaaccctcgccaaagtggtggcctgg
gccagcaagatgggcaaaaccccgattgtggtgaacgactgcccgggcttctttgtcaac
cgcgtgctgttcccgtactttgccgggtttagccagctgctgcgcgacggggctgatttc
cgcaagatcgacaaagtgatggaaaaacagtttggctggccaatgggtccggcctatctg
ctggacgtggtcggtattgatactgcgcatcacgcgcaggcggtgatggcggccggcttc
ccggagcggatgcagaaagattaccgcgatgcgatcgacgctctgttcgaatcgaaccgc
tacggtcagaaaaacggcctcggcttctggcgttataaagaagacagcaaaggcaaaccg
aagaaagaagaagacgcagcagtggacagcctgctggctgaagtcagccaggcgaagcgc
gatttcagcgacgaagagattatcgcccgcatgatgatcccaatggtcaacgaagtggtg
cgctgtctcgaagagggcattatcgccagccctgcggaagccgatatggcgctggtgtac
ggcctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctgggcagc
gcccgctatctggatatgacgcagcagtatgaacatctcggcgcgctgtatcacgccccg
gaaggtctgcgtaccaaagcgcatcataacgaagcgtactatcccccggtggagcctgcc
cgtccggttggcgcactgaaaacggcttaa
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