Leclercia sp. LSNIH3: C3F35_13290
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Entry
C3F35_13290 CDS
T05316
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leh03021
]
C3F35_13290 (rpoH)
Transcription machinery [BR:
leh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C3F35_13290 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
KORA
HTH_10
TelA
HTH_25
UCR_14kD
HTH_3
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AUY39678
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All DBs
Position
2752754..2753611
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AA seq
285 aa
AA seq
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MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKTLILSHLRF
VVHVARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSSDDDASDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANKLTYAMEGLDERSQDI
IRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctttagcccctgttggtaacctggaatcttacatc
cgggccgctaacacctggccgatgttgacggctgaggaagaaaaggagcttgctgagaag
ctgcattaccagggcgatctggaagcagctaagacgctgatcctgtctcacctgcgcttt
gttgttcacgttgctcgaaactatgcgggctacggcctgccgcaggctgacctgattcag
gaaggcaacatcggcctgatgaaggcggtgcgtcgcttcaacccggaagtgggtgtgcgt
ctggtctccttcgccgtgcactggatcaaagcggaaatccacgaatatgtgctgcgtaac
tggcgtatcgtgaaggtcgcaaccactaaagcacagcgcaaactgttctttaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggacgaagtggaaatggttgcccgcgaa
ctgggtgtttccagcaaagacgtgcgcgagatggaatcccgaatggccgcgcaggacatg
acttttgatatgtcctctgacgacgatgcgtcagacagccagccgatggctccggtcctg
tatctccaggataagtcgtccaactttgccgatggcattgaagacgataactgggaagag
caggctgcgaacaagctgacttacgcgatggaaggccttgacgagcgtagccaggatatt
atccgtgcccgctggctggacgaagacaacaagtccaccctgcaggagctggccgaccgc
tacggcgtctccgctgaacgtgtgcgtcagcttgagaaaaacgccatgaaaaaacttcgc
gccgctatcgaagcgtaa
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