Leclercia sp. LSNIH3: C3F35_14715
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Entry
C3F35_14715 CDS
T05316
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leh03016
]
C3F35_14715
Enzymes [BR:
leh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C3F35_14715
Transfer RNA biogenesis [BR:
leh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C3F35_14715
Prokaryotic type
C3F35_14715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AUY39936
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All DBs
Position
3020547..3021491
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AA seq
314 aa
AA seq
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MSRPRRRGRDVHGVLLLDKHQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPVCLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQVVEERPVAFSAEQLAAALESFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPAERMVTLEQLQALVEQAQEQGIDAADLLDPL
LMPMDSPASDYPVVNLPLISSVYFKNGNPVRTTGVPHQGLVRVTEGDDNTFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtacacggcgtgctgctactggataagcac
cagggtgcttccagcaacgacgtgctgcaaaaggttaagcgtatttataacgcgaaccgt
gccggacataccggcgcgctggatccgctggcgaccgggatgttgccggtttgcctgggt
gaagcgacgaagttttcccagtatctgctggattccgacaaacgctaccgcgtgattgcc
aggctgggccagcgcacggacacctccgatgcggatggccaggtggtcgaagaacgtccg
gtggcgttcagcgctgaacagcttgcggctgcgctggagagtttccgcggcgacacccag
caggtgccgtcgatgtattcagcactgaaataccagggcaaaaaactctacgagtacgcg
cgccagggtattgaggtgccacgcgaagcccgcccgattacggtgtatgaactgctgttc
attcgccacgaaggggatgagctggagctggaagttcactgctcaaaaggcacttacatc
cgtaccatcattgacgacctgggtgagaaactgggttgtggcgcgcacgtgatttatctg
cgccgtctggcggtgagtaaatacccggcagaacggatggtgacgctggagcagctccag
gcgctggttgagcaggcccaggagcaaggtattgatgctgccgatttgctggatccgctg
ctgatgcctatggacagtccagcttcggactatccggtggtcaatctgccgctgatctcg
tccgtttactttaaaaacggcaacccggtgcgcaccactggcgtccctcaccaggggtta
gtgcgtgtgacggaaggcgatgacaatacctttatcggcatgggcgaaattgacgacgaa
ggtcgtgttgcaccacgccgtctggtggtcgaatatccggcataa
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