Leclercia sp. LSNIH3: C3F35_15165
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Entry
C3F35_15165 CDS
T05316
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3F35_15165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_15165
Enzymes [BR:
leh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
C3F35_15165
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C3F35_15165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUY40018
LinkDB
All DBs
Position
3116196..3116702
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AA seq
168 aa
AA seq
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MINDILAPGLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIYQAGFTDKLLKPEEEQQLL
DTRCGITMLVERPTVQASEVNLHELRSGGRELIKKIEDYQPAALAILGKQAYEQAFSQRG
VQWGKQKITIGVTQVWVLPNPSGLNRATLDKLVEAYRELDQALVTRGL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgacatacttgcaccaggactgcgggtggtgttctgcggtatcaacccgggc
aagtcctctgcccacaccggttttcactttgcccatccgggaaatcgcttctggaaggtg
atctatcaggcggggtttaccgacaagctgctgaagccggaagaggagcaacagctgctg
gatacgcgctgtggcatcaccatgctggtggaacggcccacggtgcaggcgagcgaggtg
aatctgcatgagctgcgcagcggcgggcgcgagttgattaagaagattgaggactaccag
cctgcggcgctggcgattctgggcaagcaggcctacgagcaggcattcagccagcgtggg
gtgcagtggggaaagcagaagatcaccatcggcgtgacgcaggtatgggtgctgcccaat
ccgagcgggctgaacagggcgacgctggataagctggtagaggcgtatcgcgagctggat
caggcgctggtgacacgggggctgtga
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