Leclercia sp. LSNIH3: C3F35_16260
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Entry
C3F35_16260 CDS
T05316
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3F35_16260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_16260
Enzymes [BR:
leh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C3F35_16260
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3F35_16260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
NAT10_TcmA_helicase
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
MukB
AAA_16
AAA_28
UvrD_C
PhoH
DO-GTPase1
CbiA
ATPase
T2SSE
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
AUY40216
LinkDB
All DBs
Position
3338653..3340473
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AA seq
606 aa
AA seq
DB search
MTMQELLLEAVEQRVLRRLDVQFAMMVAGNDEPSVMLATAILSRDTGEGHVCLPLSRLQA
EAKTAALQACFALHDETLDWPTTLMRSRAVSAGDEPTPLVLTGDRLYLNRMWRYERAVAS
FFSEANQPLPHDSADVQRTLNALFTSDEAVNWQKVAAAVALTRRISVISGGPGTGKTTTV
ARLLAALIQMAGEEKCRIRLAAPTGKAAARLTESLGGALQQLPLSDLQRKRFPTEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTWASAGFTVQRAQELAGMTGCQMEGNISPVAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHAIRSVFDGTFSDIEKKQLQSGEEYLVMLEDALQGYHHFLDR
VQHQASEEEILAAFGSYQLLCALRDGPFGVAGLNERLEHVLVQKRRISRQPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGQGLRVWFQMPDGSLKSVQPSRLPEHETAWAMTVHKS
QGSEFDHAALILPTQMSPVVTRELVYTAITRARRRLSLYADDGVLVQAVTTRTERRSGLS
AIFEAL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggaattattgctggaggccgtagaacagcgcgtgttgcgtcgtctggat
gtgcagtttgcgatgatggtggcggggaatgatgaaccctccgtgatgctggcgacagcc
atcttgagccgggataccggcgaggggcatgtctgcctgccgctgtcacgcctgcaggcg
gaggcgaaaaccgccgccctgcaggcctgttttgccctgcatgatgaaacgctggactgg
cccacaacgctgatgcgttcccgggctgtgagcgcaggggacgagccaacgccgctggtg
ctgacaggggaccggctctacctcaaccgcatgtggcgctatgagcgggctgtggccagt
ttctttagcgaagccaaccagccgttgcctcatgacagtgctgacgttcagcgtaccctg
aacgcgctgttcacctctgacgaagccgttaactggcaaaaggtggcggcggccgtggcg
ttaacgcggcgtatctcggtaatttccggcggaccgggcaccggtaaaaccaccaccgtc
gcccgcctgctggcggcgctgatccagatggcgggagaggagaagtgccgtatccggctg
gccgccccaaccggtaaagccgccgcgcgcctcaccgagtctctgggcggtgcgctgcaa
cagctcccgctgtccgacctccagcgtaagcgtttcccgaccgaagcgagtaccctgcac
cgtttgcttggtgctcagccgggcagccagcgtctgcgctaccatgccgggaatccgtta
catctggatgtgctggtggtggatgaggcctcgatgatcgacctgaccatgatgtctcgt
ctgattgacgccttgccgcctcatgccagggtcatcttcctcggcgatcgcgatcagctg
gcctctgtcgaagcgggtgcggtgctgggcgatatttgtacctgggccagcgccggtttt
accgtgcagcgtgcccaggagctggccgggatgacaggatgccagatggaaggcaacatc
agtccggtcgcgggcgcgctgcgtgacagcctttgcctgctgcaaaaaagctaccgattt
ggcagcgactccggcatcgggcagctggcggccgcggtcaaccgcggcgatcgtcacgct
attcgctcagtatttgacggcacgttcagtgatatcgagaaaaagcagctccagagcggg
gaagagtatctggtgatgctggaggatgccctgcagggttatcaccatttccttgaccgg
gtgcaacatcaggcctccgaagaagaaattctggcggcatttggcagctaccagctgctg
tgcgccttacgtgacgggccttttggcgtggccggactcaacgaaaggctggagcacgtg
ctggtgcaaaaacgccgcatcagccgtcagccacattcacgctggtatgaaggacgcccg
gtgatgatctcgcgtaacgacagtgcgctggggttgtttaacggtgatatcggcattgcg
ctggatcgggggcaggggctgcgcgtctggttccagatgccggatggcagcctgaagtcc
gtccagccgagccgcctgccggagcatgaaaccgcatgggcgatgacggtgcataaatcc
cagggttctgagttcgatcatgcggcgctgattttgcctactcagatgtccccggtggtc
acccgcgagctggtctataccgccattacccgcgcacggcggcggctatcactgtatgcg
gatgacggtgtgctggtgcaggcggttaccacccgaacggagcgacgcagcggtctgagt
gcgattttcgaagccttgtaa
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