Leclercia sp. LSNIH3: C3F35_19140
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Entry
C3F35_19140 CDS
T05316
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leh03032
]
C3F35_19140
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_19140
Enzymes [BR:
leh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C3F35_19140
DNA replication proteins [BR:
leh03032
]
Prokaryotic type
DNA Topoisomerases
C3F35_19140
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3F35_19140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AUY40720
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Position
3942912..3945548
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELMADLEKETVDFVDNYDGTERIPDVMPTKIPNLLVNGASGIAVGMAT
NIPPHNITEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHHGQPKIMNLKDILSAFVRHRRE
VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAALVAQPWALGNV
SAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSADRLMEVIREELALVRDQFGDERRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEQNERITAILPVREYAEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKESAVRAMGRTATG
VRGIKLAGEDSVVSLIVPRGEGAILTVTQNGYGKRTAQDEYPTKSRGTQGVISIKVTERN
GSVVGAVQVDDTDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSVAEGDDEIAPEADTDDDAADDAEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggttaacatcgaggaagagctgaagagctcc
tatctggattatgcgatgtcggtcattgttggccgtgcgctgccggatgtccgcgatgga
cttaagccggtacaccgtcgcgtactatacgccatgaacgtattgggcaatgactggaat
aaagcctacaaaaaatctgcccgtgtcgttggtgacgtaatcggtaaatatcacccgcat
ggtgataccgccgtgtacgacaccatcgtccgtatggcgcagccattctccttgcgttac
atgctggtagatggtcagggtaactttggttcggtcgatggtgactccgcggcggcgatg
cgttatacggaaatccgtatgtcgaaaatcgcccacgagctgatggccgacctggaaaaa
gagaccgttgatttcgtcgataactacgacggcaccgagcgcattcccgatgtgatgcca
accaagatccctaacctgctggtaaacggtgcgtccggtatcgcagtaggtatggcgact
aacattccgccgcacaacatcacggaagtgatcaacggttgcctggcctatatcgacgat
gaagacatcagcattgaagggctgatggaacacatccccggcccggacttcccgaccgcc
gccatcattaatggccgtcgcggcattgaagaagcgtaccgtaccggtcgcggcaagatc
tatattcgtgcccgcgcagaagtcgaagccgacgccaaaaccggccgtgagaccatcatc
gtccacgaaataccgtatcaggtgaacaaagcgcgcctgatcgagaagattgccgagctg
gttaaagagaaacgcattgaaggtatcagcgcgctgcgtgatgagtctgacaaagacggc
atgcgtatcgtgattgaaatcaaacgtgacgcggtaggggaagtggtactgaacaacctc
tactccctgactcagcttcaggtctccttcgggatcaacatggttgcgctgcaccatggt
cagccgaagatcatgaacctgaaagacattctgagcgcgttcgtgcgtcaccgccgtgaa
gtggtgactcgccgtaccattttcgaactgcgtaaagcccgcgatcgtgcgcacatcctt
gaagcgctggccgttgcgctggcgaacatcgatccgatcatcgagctgattcgccgtgcg
ccaacccctgcggaagcgaaagcggcgttagtggctcagccttgggcgctgggtaatgtc
tcagcaatgctggaacgtgcgggcgatgacgctgcgcgtccagagtggctggaacccgag
ttcggcgtgcgtgatggccagtactatctgaccgagcagcaggctcaggcgattctggat
ctgcgtctgcagaaactgaccggccttgagcacgaaaaattgctcgacgagtacaaagag
ctgctggaacagattgccgagctgctgcatatcctcggcagcgccgatcgtctgatggaa
gtgatccgcgaagagctggcgctggttcgcgatcagttcggcgatgagcgtcgcactgaa
atcacggccaataccgctgatatcaacatcgaagacctgatcaaccaggaagacgttgtt
gtgaccctgtctcaccagggctacgtgaagtaccagccgttaaccgactacgaagcacag
cgtcgtggcggtaagggcaagtcagcggcacgtattaaagaagaagactttatcgaccgc
ctgctggtggcaaacacccacgacaccatcctctgcttctcaagccgtggccgtctgtac
tggatgaaggtctatcagctgccggaagcgagccgtggcgcacgtggacgtccaatcgtc
aacctgctgccgctggagcagaacgagcgtatcaccgccattctgccggttcgcgagtac
gcagaaggcgtgaacgtctttatggcaaccgccagcggtacggtgaagaagaccgccctg
accgagttcagccgtccacgttctgccggtattatcgccgtcaacctgaacgaaggcgac
gaactgattggtgtggatctgacctccggttccgacgaagtgatgctgttctctgccgcc
ggtaaagtggtgcgcttcaaagagagcgcagtgcgcgccatgggtcgtactgcgaccggt
gttcgcggcatcaaactggcgggcgaagacagcgttgtctccctgattgttccgcgtggc
gaaggcgcaatcctgaccgtcacgcagaacggctacggtaaacgtaccgcccaggacgag
tatccaaccaagtcccgcggcacccagggcgttatctcgatcaaagtgaccgagcgtaac
ggctcagtggttggcgcggttcaggttgatgataccgaccagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgcgtgtccgagatcagcgtggtaggccgtaatacccag
ggcgtgatcctcatccgtaccgcggaagatgagaacgtggtgggtctgcagcgcgtcgct
gagccagtggatgacgaagagctcgactccatcgacggcagcgtagcagaaggtgacgat
gagatcgcaccggaagcggatactgacgacgatgcagcggatgacgctgaagagtaa
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