Leclercia sp. LSNIH3: C3F35_21090
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Entry
C3F35_21090 CDS
T05316
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00061
Fatty acid biosynthesis
leh00071
Fatty acid degradation
leh01100
Metabolic pathways
leh01212
Fatty acid metabolism
leh02024
Quorum sensing
leh04146
Peroxisome
Module
leh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C3F35_21090
00071 Fatty acid degradation
C3F35_21090
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C3F35_21090
09145 Cellular community - prokaryotes
02024 Quorum sensing
C3F35_21090
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
leh01004
]
C3F35_21090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leh04147
]
C3F35_21090
Enzymes [BR:
leh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C3F35_21090
Lipid biosynthesis proteins [BR:
leh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C3F35_21090
Exosome [BR:
leh04147
]
Exosomal proteins
Exosomal proteins of breast milk
C3F35_21090
Exosomal proteins of breast cancer cells
C3F35_21090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AUY41068
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All DBs
Position
4349217..4350968
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AA seq
583 aa
AA seq
DB search
MLTTCLLTGAVMTTNTHFRGDVVKKVWLNRYPADVPAEINPDRYQSLVELFEHSVTRYAD
QPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAG
MIVVNVNPLYTPRELEHQLNDSGAAAIVIVSNFAHTLEKVVDKTQVKHVILTRMGDQLST
AKGTLVNFVVKYVKRLVPKYHLPDAISFRRALHNGYRMQYVKPEVVSQDLAFLQYTGGTT
GVAKGAMLTHRNMLANLEQVNATYGPLLHRGKELVITALPLYHIFALTMNCLLFIELGGQ
NVLITNPRDIPGLVKELAKYPFTAMTGVNTLFNALLNNKEFQQLDFSTLHLSAGGGMPVQ
QAVAERWVKLTGQYLLEGYGLTECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDEDNE
VPHGEPGELCVKGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDDEGFLRIVDRKKDMI
LVSGFNVYPNEIEDVVMQHNGVLEVAAVGVPAGSSGETVKIFVVKKDPDLSEEALITFCR
RQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAKVDNKA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgacttgtttattaaccggggctgtgatgacgacgaacacgcatttcagaggt
gatgtagtgaagaaggtttggcttaaccgttatcctgcggatgtgcctgcagagataaat
cctgaccgttatcaatccctggttgaactgtttgaacattccgtcacgcgctacgccgat
cagcctgcgtttgtgaacatgggcgaggtgatgaccttccgtaagctggaagagcgcagc
cgggcatttgcagcctacctgcaacagggcttaggcctgaaaaaaggcgatcgggtagca
ttgatgatgcctaacctgctgcagtatccggtggcactgtttggcatcctgcgcgccggg
atgatcgtggttaacgttaacccgctctacaccccgcgtgagctggagcaccagctgaac
gacagcggcgcggcggcgattgtgattgtctcaaacttcgcgcacaccctggaaaaagtg
gtcgataagacgcaggtcaaacacgttattctcacccggatgggcgatcagctctcaacc
gcaaaagggacgctggttaacttcgtcgttaagtacgttaaacgtctggtgccaaaatat
cacctgccagacgccatctccttccgccgggcgctgcacaacggctaccggatgcagtac
gtgaaaccggaagtggtgtcccaggatctggccttcctgcagtacaccggcggcaccacc
ggggttgcgaaaggggcgatgctcacccaccgcaacatgctggcgaacctcgagcaggtg
aacgccacctacggcccgctgctgcatcgcggcaaagagctggtgatcaccgcgctgccg
ctctatcacatcttcgcgctgaccatgaactgcctgctgtttatcgagctgggtgggcag
aacgtcctgatcaccaacccgcgcgacattccgggcctggtgaaagagctggcgaaatat
ccgtttaccgccatgacgggggtaaacacgctgttcaacgccctgttgaacaacaaagag
ttccagcagcttgatttctcgactctgcatctgtcggcgggcggcgggatgccagtgcaa
caggcggtggcggaacgctgggtgaagctcaccggccagtatctgctggagggctatggc
ctgaccgagtgcgcccctctggtgagcgtgaacccgcacgatatcgattaccacagtggc
agcattggcctgccggtgccctccactgaagccaaactggtggatgacgaggataacgaa
gtgccgcatggcgaaccgggcgagctgtgcgtgaaagggccgcaggtgatgctgggctac
tggcagcgcccggacgccaccgatgaaatcattaaggacggctggctgcacaccggggat
atcgcagtgatggacgacgaaggcttcctgcgaatcgtcgatcgtaagaaagacatgatc
ctcgtctccgggtttaacgtctatccgaacgagatcgaagatgtggtgatgcagcacaac
ggtgtgctggaagtggccgcagtgggcgttccggcgggcagcagcggtgaaacggtgaaa
atctttgtggtgaaaaaagatcctgacctcagcgaagaggcgctgatcaccttctgccgt
cgccagctgaccggctacaaagtgccgaaactggtggagtttcgcgatgaactgccaaaa
tcgaacgtcgggaagatattacgacgagaattacgtgacgaagcacgcgccaaagtagac
aataaagcctga
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