Leclercia sp. LSNIH3: C3F35_21620
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Entry
C3F35_21620 CDS
T05316
Name
(GenBank) DNA-binding transcriptional regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leh03036
]
C3F35_21620
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_21620
Chromosome and associated proteins [BR:
leh03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
C3F35_21620
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3F35_21620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6626
TetR_C_24
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
AUY41160
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Position
complement(4455770..4456183)
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AA seq
137 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQ
YREMLIADGIDPNELLNSMAAAKTGTKAKRAARPAKYSYIDENGESKTWTGQGRTPAVIK
KAMDEQGKQLDDFLIKD
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattctgaacaacatccgtactcttcgtgcccaggcgagagaa
tgtactctggaaacgctggaagaaatgctggaaaaattagaagttgttgttaatgagcgt
cgtgaagaagaaaacgccgcagcagctgaaatcgaagaacgtacacgtaaactgcagcaa
tatcgtgaaatgctgattgctgatggtattgatccaaacgaattgctgaacagcatggct
gccgctaaaacaggcaccaaagctaaacgcgctgcacgtccggctaaatatagctacatc
gatgagaatggcgaatctaaaacctggaccggccagggccgtactccagcggttatcaaa
aaagccatggacgagcaaggcaaacaactggacgacttcctgattaaggattaa
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