Leclercia sp. LSNIH3: C3F35_22210
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Entry
C3F35_22210 CDS
T05316
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
leh
Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
leh03009
]
C3F35_22210
Enzymes [BR:
leh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C3F35_22210
Ribosome biogenesis [BR:
leh03009
]
Prokaryotic type
rRNA helicases
C3F35_22210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
PMI_typeI_cat
AAA_22
AAA_19
Toxin_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
AUY41271
LinkDB
All DBs
Position
4581262..4582635
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AA seq
457 aa
AA seq
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MTAFSTLNVLPAAQLDNLNELGYLTMTPVQAAALPAILEGRDVRVQAKTGSGKTATFGLG
LLQHIDASLYKTQSLVLCPTRELADQVAAELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALQTLVLDEADRMLDMGFSEAIDEVTRFAPPSRQT
MLFSATWPEAIAAISGRVQQNPIAIEIDTVDALPAIEQQFFDTTQRGKIPLLQKLLSVHQ
PASCVVFCNTKKDCQAVCDALTEAGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILAEML
QIKLNWVDAPANVSIVPLAAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQSVAHKAWKQLQNGKIKGKNCKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctttttcaacgctgaacgtactgcctgccgcccaactcgataatctcaacgag
ttgggttacctgacgatgacccccgtacaagctgccgccctgccagcgatcctggaagga
cgtgatgttcgtgtgcaggcgaaaaccggcagtggcaaaacggcgacttttggtcttggg
ctgttacagcatattgatgccagcctttataagacgcagtcgctggtgctttgcccgacg
cgcgagctggcggaccaggtcgcggctgagttacgtcgtctggcacgttttctgccaaac
accaaaattttaactttgtgcggcggccagccgttcggcgcccagcgtgattccttgcag
catgcgccgcatatcatcgttgccacgccgggtcgtttgctcgatcacctgcaaaagggg
acggtctctctcgacgcgctgcagaccctggtgctggacgaagctgaccggatgctggac
atgggctttagcgaggccatcgatgaggtgacccgttttgccccgccatcgcgtcaaacc
atgctcttctctgctacctggccagaggcgattgccgccattagcggccgtgtgcagcaa
aacccgatcgccatcgaaattgatactgttgacgcactgcccgcgatcgaacagcagttc
ttcgataccacccaacggggcaaaatcccgctactgcaaaagctgcttagcgtgcaccag
cccgcttcctgcgtggtgttctgtaacaccaaaaaagattgtcaggccgtgtgcgatgcc
ctgaccgaagccggtcagagcgcgctgtcgctgcatggcgacctcgaacagcgcgatcgc
gatcaaaccctggtgcgtttcgctaacggcagtgctcgcgtgctggttgcgaccgacgtc
gccgctcgcggcctggacatcaaatccctggagctggtggtgaactacgagctggcgtgg
gatccagaagttcacgtccaccgtatcggccgtacggcccgtgctggtaacagcggtctg
gccatcagcttctgcgcaccggaagaggcgcagcgcgctaacattctggcggaaatgctg
caaatcaaactgaactgggtggatgctccggcaaatgtcagcatcgtgccgctggctgcc
gagatggccacgctctgtatcgacggcgggaaaaaagccaaaatgcgtcccggtgatgta
ttaggtgcgctgacgggcgatatcgggctggacggtgctgatattggtaaaatcgcggtg
catccggcgcatgtgtatgtggcggtgcgtcagtcggtggcgcataaagcctggaagcag
ctgcaaaacggcaagatcaagggcaaaaactgcaaggttcgtctgctgaaataa
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