Leclercia sp. LSNIH3: C3F35_24925
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Entry
C3F35_24925 CDS
T05316
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh03420
Nucleotide excision repair
leh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3F35_24925
03430 Mismatch repair
C3F35_24925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leh03400
]
C3F35_24925
Enzymes [BR:
leh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3F35_24925
DNA repair and recombination proteins [BR:
leh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3F35_24925
MMR (mismatch excision repair)
Other MMR factors
C3F35_24925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_11
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUY41924
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Position
pLEC-7c0d:42103..43902
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AA seq
599 aa
AA seq
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MFMWNKDDLNPEQEAAILKPGSVFLIACPGSGKTRTLTYKIAYELSRLKSNKQFVVAITY
THRAADEIHERIESLGVDTSRLWIGTIHSFCLEWILKPYGIYHEALDRGFRVIDQHEREK
ILEALCKPYQKPKITFWDCEFYYTETGYVLSCPQDWKHSGLHVILGKYFEILHESRQLDF
ELILYYAYQLIARHPAISTLLAQLFSFVLIDEYQDTKRIQYSIITAILKAGQGATKAFIV
GDPNQAIYQSLGGYPIAFEDFKAMANIDLDELELSRNYRSSERIIEYFGNYNVHNTRIEA
ASEDKAYPSLISFDDTVSKNDLDAELIRLIRFNIETMGISPHEVCILAPQWTHLASMTRR
LVASMPEYSFDGPGMVPFARDTENFWYRLSKIALTQASPGMYVRRLRWAGEILNDLEAAG
ASVSKLTRRSLLRECNAIKIDETDGLTYLSAFFERLFANLAIDFRLFTLLQEHHVAFFDS
SQARVNRLKSEGSEFIGDIETFRKVFQHRTGITISTIHGVKGAEFDAVIAYALLEDMVPH
FNDPNGQESAMKLLYVIGSRARKNLHLVSERGRVRQYSGEEYQVTRKLASCSFGYDQIP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgtggaacaaagatgatctgaatcccgagcaggaagcagccattctgaagcca
gggagcgtctttctcatcgcttgcccgggcagcgggaaaacgcgcacgctcacctacaaa
atcgcctatgagttgtccaggctgaaatcgaacaagcagtttgtcgttgccatcacttat
acgcaccgtgccgccgacgaaatccacgagcgcattgagagccttggggtggatacatcc
cgattatggataggaacgatacattcgttctgtcttgaatggatattgaaaccgtacggc
atctatcacgaagcgttggatcgaggcttccgtgtgatcgatcagcatgagcgcgagaaa
atcctggaggcattgtgcaagccttaccagaagccaaaaataacattctgggattgtgag
ttttattacaccgaaactggatatgtgctctcctgcccacaagattggaagcattcgggt
cttcacgtcatattgggcaagtattttgagattctgcacgaaagtcggcagctagacttt
gagctcattctttactatgcgtaccaactgatcgcacgtcatcctgcgatcagcactctt
ctggcacagttgttctctttcgtgctgatcgacgagtatcaggacaccaaacgaattcag
tattcgatcatcaccgccattctgaaagctggtcaaggtgcgaccaaggcctttattgtc
ggagatcctaaccaggcgatttatcaatcgcttggcggatatccgattgccttcgaggat
ttcaaggcgatggccaatatcgatttggacgaactcgaactgtcgcggaactaccgttct
tctgagcgcatcattgagtacttcggaaactacaacgttcacaacacacgcatcgaagcc
gcatccgaggacaaggcgtacccaagccttatttcattcgacgacacagtgagcaaaaat
gatctggacgctgagctcatccggctcatccgtttcaacattgagactatgggcatctca
cctcacgaggtgtgcattctcgcgccacagtggacgcatcttgcaagcatgacacgtcgt
ttggtcgccagcatgccggagtactcattcgatggccccggtatggttccctttgcacgg
gacacagagaatttctggtacaggctttctaagattgcacttactcaggcatcgccggga
atgtatgtgcgcagactgcggtgggccggggagattctgaatgacctagaggcggccggg
gctagcgtgtcgaagctcacgcggaggtccttgttgagggagtgcaatgcaattaagatc
gatgaaacagatggtcttacctacttgagcgcatttttcgagcgtctgtttgcaaactta
gcaatcgactttcgccttttcacgctgcttcaagagcatcacgttgccttcttcgatagt
tcgcaagcccgggtaaatcgattgaagagtgaaggtagcgaatttataggcgatattgag
acattcaggaaggtatttcagcataggactggaatcaccatctcgacgatacacggcgtc
aagggagccgagttcgatgcagtgatcgcttatgcattattagaagatatggtgccgcat
ttcaatgatccgaacggtcaagaaagcgcgatgaaattgctgtatgtcattggttcgcgg
gcaaggaagaacctgcaccttgtttcggaacgaggtcgagttcgccagtattctggcgaa
gagtatcaagtaactcgcaagcttgcctcatgcagttttggatacgatcaaattccatag
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