Leclercia sp. LSNIH1: C2U54_00075
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Entry
C2U54_00075 CDS
T05297
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei00040
Pentose and glucuronate interconversions
lei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C2U54_00075
Enzymes [BR:
lei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
C2U54_00075
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GFIT
Motif
Pfam:
Pectate_lyase22
PD40
PolyG_pol
Motif
Other DBs
NCBI-ProteinID:
AUU82525
UniProt:
A0AAD0D0J3
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Position
15539..16714
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AA seq
391 aa
AA seq
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MAKGMRVKLNYEVSRDPDTGVEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLDLKNAEAVQLTEGAGDNTFGGFLSPDDKSLYYVKNDRTLREVNLTTLEEREVYRV
SDDWVGYGTWVANSDCTKLVGIEIAKSDWTPLNDWKIFHDFFHKGPHCRLLRVDLQTGES
SVIHEEKNWLGHPIYRPFDDSTVAFCHEGPHDLVDARMWMVNEDGSNVRKVKEHAAGESC
THEFWVPNGSALVYVSYLKGEQGRTVYSFNPDTGENRAVMKMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTSGYTIDNDPYLYAFDVAKEAYFRIARHDTSWATVANSRQVTHPHPSFTP
DDKAVLFSSDKDGKPALYIAKLPEQPELLRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtatgcgggtcaaactgaactatgaggtcagccgcgatccggatacaggc
gtggaagtgacccgcctgaccccccctgaagttacctgtcaccgtaactacttctatcaa
aagtgctttttcaacgatggcagccacctgctgtttgcgggtgaattcgatggccactgg
aactactatctgctggatctgaaaaacgccgaagcggtgcagttaaccgaaggcgcaggc
gataacacctttggcggcttcctctcaccggatgataaatccctctattacgttaagaat
gatcgcaccctgcgggaagtcaatctgaccaccctagaggagcgtgaagtctatcgcgtc
agcgacgactgggtcggctatggcacctgggtggccaacagcgactgcaccaaactggtg
ggcatcgaaattgcgaagagcgactggacgccgctcaacgactggaaaatcttccacgac
ttcttccataaaggcccacactgccgcctgctgagggtcgatctgcagaccggtgaaagc
agcgtaatccatgaagagaagaactggctgggccacccgatttaccgtccgtttgacgac
agtaccgtcgcgttctgtcatgaaggcccgcacgatctggtggatgcccgtatgtggatg
gtcaacgaagacggcagcaacgttcgcaaggtgaaagagcacgccgcaggcgaaagctgc
acccatgaattctgggtaccgaatggctcagcgctggtctatgtctcttacctgaaaggt
gagcaaggacgtaccgtgtatagcttcaatccggataccggtgagaaccgcgcggtcatg
aagatgcctgcctgttcacacctgatgagtaactttgacggcacgctgctggtcggtgat
ggttccggtacgccggtcgatgtgaaagataccagcggctataccatcgataacgatccg
tatctttatgcattcgacgtggcgaaagaggcgtatttccgtatcgcgcgtcacgatacc
tcctgggcaaccgtggcaaacagccgtcaggtcactcacccgcacccctcctttaccccg
gatgataaagcggtgctgtttagttccgataaagatggcaaacctgctctctatattgcg
aagcttcctgagcaaccagaactgttgcgagaataa
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