Leclercia sp. LSNIH1: C2U54_04125
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Entry
C2U54_04125 CDS
T05297
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U54_04125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_04125
Enzymes [BR:
lei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U54_04125
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U54_04125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AUU83248
UniProt:
A0AAD0DAN8
LinkDB
All DBs
Position
798633..800828
Genome browser
AA seq
731 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPDNMQAEAGCRVNVPFGKQQRVGIVVSVSQHSELPLSELK
SVVEVLDSEPVFSASVWRLLLWAADYYHHPIGDVLFHALPILLRQGKSASHAPMWYWFAT
EQGQAVDINSLKRSPKQQQALAALRQGRIWRHQVESLDFNDAALQSLRKKGLSELACEAP
ALIDWRDGFSVAGDRLRLNTEQATAVGAIHSASDRFSAWLLAGVTGSGKTEVYLSVLENV
LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI
GTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL
ETLHNVRQRKYHLLRLTRRAGNARPAMQHVLDLKGQPVQAGLAPALIARMRQHLQADNQV
ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS
THMVPVGLGTEQLEQALAPFFPGVAISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM
LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP
EHPLLQTLLHKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQAPLFLQQLRNLLQ
ASPLVDNQLWILGPVPALAPKRGGRYRWQILLQHPSRVRLQHIVSGTLALINTLPEARKV
KWVLDVDPIES
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgctcacgttgccctgcccgttccgcttccccgtacctttgactacctgctg
ccagacaacatgcaggctgaggcgggctgtcgcgtgaatgtgccgtttggcaaacagcag
cgggtgggtattgtcgtctccgtaagccagcacagcgagttgcctctcagtgaactcaaa
agcgtggtcgaggtgctggacagcgagccggtcttttccgccagcgtctggcgactgctg
ctgtgggcggccgactattatcatcatcccattggcgatgtgctgtttcacgccttaccc
attctgctgcgacagggcaaaagcgccagccatgcgccgatgtggtactggtttgccacc
gagcagggccaggcggtagatattaatagcctgaaacgttccccgaaacagcagcaggcg
ctggcggcgttacgccagggcaggatctggcggcatcaggttgagagcctcgactttaac
gacgcggcgttgcagagcttacgtaaaaaagggctgagcgaactggcctgcgaagcccca
gcgcttatcgactggcgcgacggttttagcgtcgcgggcgaccgtctgcggctcaatacc
gaacaggcgaccgccgttggggcgatccacagcgcgtccgatcgcttttcagcctggctg
ctggcgggcgtgaccggttccggtaaaactgaagtctatctgagcgtactggaaaatgtg
ctggctcagggcaagcaggcgctggtgatggtgccggaaatcggtctgaccccgcagacc
atcgcccgttttcgcgagcgcttcaacgccccggtcgaggtgctgcactccggcttaaat
gacagcgagcgcctgagcgcctggctgaaagcgaaaaatggcgaagcagcaatcgtgatt
ggcacccgctcatccctgtttacaccctttaaaaatctcggggtgatcgtcatcgacgaa
gagcacgacagctcttataaacagcaggaaggctggcgctatcacgcccgcgacctggcg
gtctatcgcgcccacagcgaacagatcccaatcattctcggctccgcgacccctgcgctg
gagacgctgcataatgtgcgccagcgaaaataccatctattacgcctgacgcggcgggcg
ggtaatgcccgtcctgccatgcagcacgtactggatctgaaaggtcagccggtgcaggcc
gggctagccccggcgctgatcgcccgcatgcgccagcatctgcaggccgacaaccaggtg
attctgtttctcaaccgtcgcggctttgccccggcgctgctgtgccacgactgcggctgg
atcgctgaatgcccgcgctgcgatcactactataccctgcatcaggcccagcaccatttg
cgctgtcaccactgcgacagccagcgaccggtgccgcgccagtgtccttcctgcggctcg
acccatatggtgccggtcggtctgggcaccgagcagctggagcaggcgctggcccccttc
ttcccgggcgtggctatctcacgtatcgatcgcgacaccaccagccgcaaaggtgccctt
gagcaacagctggcggaagtgcatcgcggcggggcgcgtattctgatcggtacccagatg
ctggccaaaggacaccacttcccggacgtgaccctggtggcgctgctggatgtcgacggg
gcgctcttctcggctgatttccgctccgcggagcgctttgcccagctctatacccaggtg
gcaggccgtgccgggcgcgccggtaaacagggcgaggtggtgctacaaacccaccacccc
gagcatccgctgctgcaaaccctgctgcataaaggctacgacgccttcgccgaacaggcg
ctggcggagcgtcagaccctgcaactcccaccgtggacaagccatgtgattatccgcgcc
gaggatcacaacaaccagcaggcgccactgttcctccagcagctgcgcaacctgctgcag
gccagcccgctggtggataatcagctgtggattttaggtccggttccggccctggccccc
aagcgcggcggacgctatcgctggcaaatcctgctgcaacacccttcccgggtgcggcta
cagcatatcgtcagcggcacgctggcgttgattaataccctgccggaagcgcgtaaagtg
aagtgggtcctggacgttgatcctatcgaaagctaa
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