Leclercia sp. LSNIH1: C2U54_04330
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Entry
C2U54_04330 CDS
T05297
Name
(GenBank) transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
lei
Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lei03000
]
C2U54_04330
Transcription factors [BR:
lei03000
]
Prokaryotic type
Helix-turn-helix
LacI family
C2U54_04330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_38
HTH_Tnp_ISL3
HTH_23
HTH_24
HTH_11
HTH_36
Sigma70_r4_2
HTH_31
Crp
HTH_IclR
HTH_7
HTH_AsnC-type
HTH_28
MarR_2
Sigma54_DBD
DUF3465
Motif
Other DBs
NCBI-ProteinID:
AUU83288
UniProt:
A0AAD0DCT5
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Position
complement(840222..841217)
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AA seq
331 aa
AA seq
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MSLKAIAKELGLSVTTVSRALNGYYDVSSETRARVEAEAQRRGYRPNTFARRLKMGKIDA
VGLVFPVHPVPLNNSVFMDMVGEISHQLARHEIDLLLIADDDLADKHSYMRMVQSRRVDA
LIVAHTLDNDPRLEQLQAAGFPFLALGRSHLPKPYAWFDFDNYAGTHTATQHLIARGHQR
IAYLGESHNQAFITQRRQGYLDALKEAGLSSEWLRTMPPSRRAGYTTTQQLLALDAPPTA
IVTDCNTHGDGAAMALAQMGRLTGEHAVSLVVYDGLPQDSIVDIDVAAVIQSTRQGVGKQ
IADMVLQLINGSEISQLQVLWQPEFSPGQTA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttaaagccattgctaaagaactgggactgtcggtaacgacggtaagccgcgcc
ctcaacggctattatgacgtttccagcgagacgcgggcccgcgtggaggctgaagcgcag
cggcgcggctatcgcccgaacacttttgcccggcgtctgaagatgggcaagatcgacgcc
gtggggctggtctttccggttcatcctgttccgctcaataacagcgtctttatggacatg
gtcggcgaaattagccaccaattagcgcgtcatgagatcgacttactgctcattgccgat
gacgatctggctgataaacacagctatatgcggatggtgcagagccgtcgtgtggatgcg
ctgattgtggcccatacgctggataacgatccgcgtctggagcagttgcaggccgccggg
ttccccttcctggcgctcgggcgcagccatctgccaaagccctatgcctggttcgacttt
gataactatgcgggcacgcatactgccacccagcacctgattgcgcgcgggcatcaacgc
atcgcgtacctgggcgaaagccacaatcaggcttttatcactcagcgccgtcagggctat
cttgacgccctgaaagaggccggactctccagcgaatggctgcgcaccatgccgccttca
cgccgcgcaggctataccactacccaacaactgctggcgctggatgcgcccccgacagcg
atcgtcaccgattgcaacactcacggtgacggtgcggcgatggcgctggcgcagatggga
cgcttaaccggcgagcatgccgtgtcgctggtggtgtatgacggcctgccgcaggacagc
attgtcgatatcgacgtggcggcggtgatccagtccacccgtcagggcgtgggtaagcag
atcgccgatatggtgctgcaactgattaatggcagcgaaataagccagcttcaggtgtta
tggcaaccggaattctctccgggccagacggcataa
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