Leclercia sp. LSNIH1: C2U54_04565
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Entry
C2U54_04565 CDS
T05297
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03030
DNA replication
lei03410
Base excision repair
lei03420
Nucleotide excision repair
lei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U54_04565
03410 Base excision repair
C2U54_04565
03420 Nucleotide excision repair
C2U54_04565
03440 Homologous recombination
C2U54_04565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lei03032
]
C2U54_04565
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_04565
Enzymes [BR:
lei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U54_04565
DNA replication proteins [BR:
lei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C2U54_04565
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C2U54_04565
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U54_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUU83333
UniProt:
A0AAD0DCX2
LinkDB
All DBs
Position
complement(886276..889068)
Genome browser
AA seq
930 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPSHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAVSGVEADDVIGT
LAREAEKMGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVAKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYSEQDKIAGLTFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELDLTCEQLEVQQPAVEELLGLFKQYEFKRWITDVEAGKWLQAK
GAKPVAKPKETLVIDAEEEPEEEASVLSSEHYETILDEAQLQRWIEKLHQAPVFAFDTET
DSLDNVSANMVGLSFATEPGVAAYVPVAHDYLDAPEQLTRERVLELLKPILEDEKALKVG
QNLKFDRGILQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTVTFEQIAG
KGKNQLTFNQIALEEAGHYAAEDADVTLQLHLKMWPKLQKHAGPLNVFQNIEMPLVPVLS
RIERNGVKIDPAVLHKHSEEIALRLHELEQKAHEIAGEPFNLSSTKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTS
YHQAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS
RDKGLLTAFAEGQDIHRATAAEVFGMPLESVTGEQRRSAKAINFGLIYGMSAFGLSRQLN
IPRKESQKYMDLYFERYPGVLQYMENTRAQAKEKGYVETLEGRRLYLPDIKSSNAARRAG
AERAAINAPMQGTAADIIKRAMIAVDAWLEKEQPRVRMIMQVHDELVFEVHKDDLEPVSK
KIHELMENSVKLDVPLLVEVGQGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatccccgaaaatccgcttattctcgtcgacggctcgtcttacctctatcgg
gcatatcacgcatttcctccgctgaccaacagcgcaggagagcctacgggcgcaatgtat
ggtgtgctgaacatgctgcgtagcctgatcatgcagtatcagccaagccatgccgccgtg
gtcttcgatgcgaaaggcaaaactttccgggatgagctgttcgagcattacaaatctcat
cgtccgccgatgccggacgatctgcgcgcgcaaattgagcctctgcataagatggtaaaa
gcgatggggctgcctttgatggccgtctcgggcgttgaagcggacgatgttatcggtacg
ctggcgcgtgaagcagagaaaatgggccgcccggtcctgatcagcaccggcgataaagac
atggctcagctggtcacgccggggatcaccctgattaacaccatgaccaataccattctt
gggccggaagaggtcgtcgctaagtatggcgtgccgccggaactgatcatcgacttcctc
gcgctgatgggtgactcctccgataacattcctggcgtaccgggcgtgggcgaaaagacg
gcccaggcgctgctgcaaggtctgggcgggctggatacgctgtatagcgagcaggataaa
atcgccgggctgaccttccgcggtgccaaaaccatggccgctaagcttgagcagaacaaa
gaggtggcctacctctcttatcagctggcaaccatcaaaacagacgtcgagctggatctg
acctgtgaacagcttgaagtgcagcaacctgccgttgaagagctgctaggcctgtttaag
cagtacgagttcaaacgctggataaccgatgtcgaagcggggaaatggctgcaggcgaaa
ggggctaaaccagtagctaagccaaaagagaccctggtgatcgatgcagaagaggagccg
gaagaagaagccagcgtgctctcttctgagcattacgaaaccattctggatgaagcgcag
ctgcaacgctggattgaaaagttacaccaggcaccggtattcgctttcgataccgaaacc
gacagcctcgataatgtctccgccaatatggtggggctgtcatttgccacagagccgggc
gttgccgcctatgtgccggttgcccacgactatctggacgcgccagagcagcttacccgt
gagcgcgtgctcgaactccttaagccgatccttgaagatgaaaaagcgctgaaggtaggg
caaaacctgaagttcgatcgcggtatcctgcaaaactacggtatcgaactgcgcggcatt
gcgttcgataccatgctggagtcctatatcctcgacagcgtcgccggtcgtcacgatatg
gattcgctctccgaccgctggctgaagcataaaaccgtcacctttgagcagatcgccggt
aagggcaagaatcagctgacctttaaccagatcgccctggaagaggcggggcactatgcg
gcagaagacgctgacgtcacgctgcaactgcatttaaagatgtggccgaagctgcaaaaa
cacgccgggccactgaacgtgttccagaatatcgagatgccgctggtgccggttctgtcc
cgcatcgagcgcaatggcgtgaaaatcgatccggctgtgttgcacaagcactcagaagag
atcgccctgcgtctgcacgagctggaacaaaaagcgcatgagatcgccggcgagccgttt
aatctctcgtccactaaacagctgcagaccatcctgtttgaaaagcagggtatcaagccg
ctgaagaaaacgccgggcggggcgccgtccacctctgaagaggtgcttgaggagctggcg
ctggactatcctctgccaaaagtgatccttcagtatcgtgggctggcaaagctaaaatcg
acctacaccgataagctgccgttgatgatcaacccaaaaacgggccgtgtacacacctct
taccatcaggcggtagcggctaccgggcgactctcctcaaccgatcctaacctgcaaaac
attccggtgcgtaatgaagaagggcgccgtatccgtcaggcgtttattgcgccagaggat
tacgtcatcgtctctgctgactattcacagattgagctgcgcatcatggcgcacctctcc
cgggataaagggctgttgaccgcctttgctgaagggcaggatattcaccgggccacggca
gccgaagtgtttggtatgccactggagagcgtcaccggggaacagcgccgcagcgcgaag
gcgatcaactttggccttatctacggcatgagcgcctttggcctctcccgccagctcaat
attccgcgcaaagagtcgcagaagtatatggatctctatttcgagcgctacccgggcgtg
ctgcaatatatggagaacacgcgcgcccaggcaaaagaaaaaggctatgtcgaaaccctg
gaagggcgtcgcctctatctgccggacatcaaatccagtaatgcggcccgccgtgccggt
gccgaacgtgcggcaatcaacgccccgatgcaggggacggcggcagatatcatcaaacgt
gcaatgatcgccgttgacgcctggctggagaaagagcagccgcgggtgcggatgatcatg
caggtacacgatgaactggtgtttgaggtgcataaagacgatctggagccggtctcgaaa
aagatccatgaactgatggagaacagcgtcaaactggatgtgccgttgctggtagaagtc
ggccagggagaaaactgggatcaggctcactaa
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