Leclercia sp. LSNIH1: C2U54_04755
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Entry
C2U54_04755 CDS
T05297
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei00040
Pentose and glucuronate interconversions
lei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C2U54_04755
Enzymes [BR:
lei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
C2U54_04755
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
AUU83365
UniProt:
A0AAD0D569
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Position
complement(925579..927669)
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AA seq
696 aa
AA seq
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MKSKIPLALMMFSAFSAMATEQPHVWKAIAFGQSTDLNFSSNVLPEKIGVNDVTIDGKKL
SPQESADLAKAITLESRGGKIANSHDGLTFFYTELPTGENFVLQATVRVDQFGPENGAKP
AAQEGAGLLVRDVLGNPRQQPLKMGYEEFPAASNQVMNAIMTQDKKDHQRVKMQAITREG
ISHPWGDAGAAIKKQSYKEEVDLSQTPEFRLKLQRTDDGFITAWAPLDSDTWVSKRVPRA
DLISVQNKDHYYVGFFASRNAKITVTNASLITTSAHTVPSEPWQAEPLPVVVQLASGTVS
ASPDYLLQARANEDGVFSVRQNEVVIGNEKAVKAGEMYTLPARLEQTSTFTVTFTPAHGT
PVNQQLTVERIADRDTTHLYAAPDGKADAQGTADAPLDLATAIALLAPGGKLVLKSGDYP
QSEIPVAASGSSDKLKTLQADGKVVIHGLLLDASYWHINGIDVTGKSLRVQGSHNLIERV
TAYRNDDTGIQISSPDKIGRPLWASYNRVVDSESYGNEDPGKINADGFAVKMRVGEGNRL
ERCYSHDNIDDGFDLFNKIEDGANGVVVIENSVASNNTSNGFKLGGEGQPVAHQIRNSKA
TGNHLDGFTDNFNPGRLVVENNIAVDNQRFNYIFRPSPYGDVTTQGTFTGNVSIRNQPGE
YDDAVTGNVDNTNYFIAKGRSANSEGKELDKTQVKM
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaaatacctctggccctgatgatgtttagcgccttttccgctatggcaaca
gaacaacctcatgtctggaaagccattgcctttgggcaatcaacggatctgaatttttcc
tccaacgtgctgcccgagaaaatcggcgtcaatgatgtgaccatcgacgggaaaaagctc
tcgccccaggagagcgctgacctggcaaaagccatcaccctggaaagccggggcggcaaa
atcgccaactctcacgacggcttaacgtttttctataccgagctgccgacgggagaaaat
tttgttttgcaggccactgtccgggtcgaccagtttgggccggagaatggcgcgaaacct
gccgcgcaggagggcgccggactgctggtacgtgatgtcctcggcaacccgcgccagcaa
ccgctaaaaatgggttatgaagagtttccggcggcatcgaatcaggtgatgaacgccatc
atgacccaggataaaaaagaccatcagcgggtaaaaatgcaggctatcacccgggagggg
atcagccatccgtggggtgatgccggagccgccattaaaaaacagagttacaaggaagag
gtggatctgagccagacgccggaatttcgcctgaaactccagcgcaccgacgacggcttt
attaccgcctgggccccgctggacagcgacacctgggtgagcaagcgcgtgccgcgcgct
gacctgatttcggtacagaacaaggaccactattacgtcggcttttttgcctcccgcaat
gccaaaattacggtcactaacgcctcgctcatcaccaccagcgcccataccgtgccttcg
gagccctggcaggcagagccactgccggtcgtggtgcagctggcgtccggtacggtcagc
gcttcgccagattacctgctgcaggcgcgcgctaatgaggacggggtatttagcgtaaga
caaaacgaagtggtgatcggtaatgagaaagcggtgaaagcaggcgagatgtacaccctg
ccagcccgcctggagcagaccagcaccttcacggtgacctttacgcctgctcatggcacg
ccagtgaaccagcagctcaccgtcgaacgcattgcagacagagatacgacgcacctgtat
gccgctccggacggaaaagcggatgcacaaggcactgccgatgcgccactggatctcgcc
accgccatcgccctgctggcgcccggcggcaagctggtgctgaaaagcggcgattacccg
cagagtgagatccccgtcgctgccagcggcagcagcgataaactcaaaaccttgcaggca
gacgggaaagtggtgatccacggcctgttgcttgatgccagctactggcatatcaacggt
atcgacgtgaccggcaaaagtctgcgcgttcagggtagccataacctgatcgagcgcgtc
acggcctaccgcaatgacgataccgggatccagatctcctccccggataagattggccgg
ccattatgggcaagctataaccgggttgtggattctgaatcttacggcaatgaagatccc
ggcaagattaacgccgatggcttcgcggtgaaaatgcgggtaggggaaggtaaccggctg
gagcgttgctattctcatgacaatatcgacgacggttttgacctgttcaacaagattgaa
gatggcgcaaacggcgtggtcgtgatcgagaactcggttgccagcaacaataccagtaac
ggctttaagctcggcggagaagggcagcctgtggcgcatcagatccgcaacagcaaagcc
acgggcaatcacctggacggcttcaccgataactttaaccccggcaggctggtggtggag
aacaatatcgcggtagataaccagcgctttaactacatcttccgtccaagcccatacggc
gatgtgacaactcagggaacctttaccggcaacgtatcgatccgtaatcagccaggcgag
tacgacgatgcggtgacaggaaacgttgataacacgaactactttatcgcgaagggcaga
agcgcgaacagtgaagggaaggaactggataaaacgcaggtaaaaatgtag
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