Leclercia sp. LSNIH1: C2U54_04880
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Entry
C2U54_04880 CDS
T05297
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03030
DNA replication
lei03430
Mismatch repair
lei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U54_04880
03430 Mismatch repair
C2U54_04880
03440 Homologous recombination
C2U54_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lei03032
]
C2U54_04880
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_04880
Enzymes [BR:
lei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U54_04880
DNA replication proteins [BR:
lei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U54_04880
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U54_04880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AUU83388
LinkDB
All DBs
Position
952683..953786
Genome browser
AA seq
367 aa
AA seq
DB search
MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVTLS
QPHEAGATTVPARKFFDICRGLPEGAEIAVQLEGDRMLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPVGVTLPNHSVIVPRKGVIELMRMLDGGETPLRVQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE
EAEEILDVTYAAGTEMEIGFNVSYVLDVLNALKCENVRILLTDSVSSVQIEDAASQSAAY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccgttgaacgtgaacatttattaaaaccgctgcaacaggtgagtggccca
ttaggcggccgcccgacgctgcctattcttggtaacctgctgctgcaggtggcagacggc
acgctgtcgctgaccgggaccgatctcgagatggaaatggtcgcacgtgtgacgctttct
cagcctcacgaagcgggcgcaaccaccgttccggcgcgtaagttctttgatatctgccgc
ggactgcctgaaggggcagagattgccgtgcagctggaaggcgaccgtatgctggtgcgc
tctggccgcagccgtttttcgctctctacgctgcctgctgctgacttcccgaacctggac
gactggcagagtgaagtcgaattcaccctgccacaggccaccatgaaacgcctgattgaa
gctacccagttctctatggcgcatcaggacgttcgctactacttaaacggtatgctgttc
gaaaccgaaggggaagagctgcgtaccgttgccaccgacggtcaccgcctggcggtctgc
tccatgccggttggcgtgacgctgccgaaccattcggtgatcgtaccgcgtaaaggcgtg
attgaactgatgcgtatgctcgacggcggtgaaaccccgctgcgcgtgcagattggcagc
aacaatatccgcgctcacgtgggcgacttcatctttacctccaagctggtagatggccgt
ttcccggactatcgccgcgtattgccgaagaacccggacaaaacgctggaagcgggctgc
gatatcctcaagcaggcctttgcccgcgcggcaatcctctccaacgagaagttccgcggc
gtgcgtctgtatgtgagcgaaaaccagctgaagatcacggccaacaacccggaacaggaa
gaggccgaagagattctggatgtcacctatgccgcaggcaccgagatggaaatcggcttt
aacgtcagttacgtgctggatgtgctgaacgcgctgaagtgcgagaacgtgcgtattctg
ctgaccgactccgtgtcgagcgtacaaattgaagatgctgccagccagagtgcggcttat
gttgtcatgccaatgagactgtaa
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