Leclercia sp. LSNIH1: C2U54_06680
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Entry
C2U54_06680 CDS
T05297
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U54_06680 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lei03019
]
C2U54_06680 (groL)
03110 Chaperones and folding catalysts [BR:
lei03110
]
C2U54_06680 (groL)
03029 Mitochondrial biogenesis [BR:
lei03029
]
C2U54_06680 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lei04147
]
C2U54_06680 (groL)
Enzymes [BR:
lei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C2U54_06680 (groL)
Messenger RNA biogenesis [BR:
lei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C2U54_06680 (groL)
Chaperones and folding catalysts [BR:
lei03110
]
Heat shock proteins
HSP60 / Chaperonin
C2U54_06680 (groL)
Mitochondrial biogenesis [BR:
lei03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C2U54_06680 (groL)
Exosome [BR:
lei04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C2U54_06680 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C2U54_06680 (groL)
Exosomal proteins of breast cancer cells
C2U54_06680 (groL)
Exosomal proteins of colorectal cancer cells
C2U54_06680 (groL)
Exosomal proteins of bladder cancer cells
C2U54_06680 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AUU83718
LinkDB
All DBs
Position
1325591..1327237
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVASAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLEDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEDAIQGRVTQIRKQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAKLAGLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANMVKAGEGNYGYNA
ATEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagacgcagttaaagtgaccctgggcccgaaaggccgtaacgtggttctg
gataaatccttcggcgcaccaaccatcaccaaagatggtgtttccgtagcgcgtgagatc
gagctggaagacaagttcgaaaacatgggtgcccagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggcgacggcaccaccaccgcaactgtactggcgcaggctatcatc
actgaaggtctgaaagccgttgctgcgggtatgaacccgatggatctgaaacgtggtatc
gacaaagctgtcgcttccgctgttgaagagctgaaagcgctctccgtaccgtgctctgac
tctaaagctattgctcaggttggtaccatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggataaagtcggtaaagaaggcgtgatcaccgttgaagacggt
accggtctggaagacgaactggacgtggttgaaggtatgcagtttgaccgcggttacctc
tccccatacttcatcaacaagccagaaactggcgctgttgagctggaaagcccgttcatc
ctgctggctgataagaaaatctccaacatccgtgaaatgctgccagttctggaagccgtt
gcgaaagcaggcaagccgctggttatcatcgctgaagacgttgaaggcgaagcgctggca
acgctggtggttaacaccatgcgtggcatcgtgaaagtggctgcggttaaagcacctggc
ttcggcgatcgccgtaaagcgatgctgcaggatatcgctaccctgactggcggtaccgtt
atctctgaagagatcggtatggagctggaaaaagcgacgctggaagacctgggtcaggcg
aaacgcgttgttatcaacaaagacaccaccaccatcatcgatggcgtgggtgaagaagat
gccatccagggccgtgttactcagatccgtaagcagatcgaagaagcgacctctgactac
gatcgtgaaaaactgcaggagcgcgttgctaaactggcaggcggcgtagccgttatcaaa
gtgggtgccgctaccgaagttgagatgaaagagaagaaagcccgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgccggtggtggtgttgctctggtt
cgcgttgcagcgaaactggctggcctgaccgctcagaacgaagatcagaacgtgggtatc
aaagttgcgctgcgcgcaatggaagcgccactgcgtcagatcgtttccaacgccggtgaa
gagccgtctgttgtggcgaacatggtgaaagcgggcgaaggtaactacggttacaacgct
gctaccgaagagtacggcaacatgatcgacttcggtatcctggacccaactaaagtgacc
cgttctgcgctgcagtacgcggcctctgttgctggcctgatgatcaccaccgagtgcatg
gtcactgacctgccaaaaggcgatgcccctgatttaggtgctgctggtggtatgggcggc
atgggtggtatgggcggcatgatgtaa
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