Leclercia sp. LSNIH1: C2U54_07855
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Entry
C2U54_07855 CDS
T05297
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei00521
Streptomycin biosynthesis
lei00523
Polyketide sugar unit biosynthesis
lei00541
Biosynthesis of various nucleotide sugars
lei01100
Metabolic pathways
lei01110
Biosynthesis of secondary metabolites
lei01250
Biosynthesis of nucleotide sugars
Module
lei_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C2U54_07855 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C2U54_07855 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C2U54_07855 (rfbC)
Enzymes [BR:
lei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
C2U54_07855 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AUU83932
UniProt:
A0AAD0DC67
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Position
complement(1559673..1560221)
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AA seq
182 aa
AA seq
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MNVIQTAIPDVFIFEPKVFGDDRGFFFESFNHQQFEAAIGRSVNFVQDNHSKSSKGVLRG
LHYQLAPHAQGKLVRCVAGEVFDVAVDIRKSSPTFGQWVGVHLSGENKRQLWIPEGFAHG
FMTLSDTAEFLYKTTNYYAPESDRGIRWNDETIGITWPEIDSEILTSAKDSVAKSFPDAE
YF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattcagaccgcaatccccgacgtctttatctttgagccaaaagtgtttggc
gatgaccgtggctttttcttcgaaagctttaaccaccagcagttcgaagctgccattggc
cgcagcgtcaacttcgtgcaggacaaccactctaaatcctcaaaaggcgttctgcgtggc
ctgcactaccagctggcgccacatgcgcagggcaaactggtgcgttgcgtggcgggtgaa
gtcttcgacgtggcggtggatatccgtaaaagctccccgaccttcggtcagtgggtgggt
gtgcatctgtctggcgagaacaagcgccagctgtggatcccggaaggtttcgcccacggc
tttatgaccctgagcgacaccgcagagttcctgtataaaaccaccaactactacgcgccg
gagagcgaccgcggcatccgctggaacgatgagaccattggtattacctggccagaaatc
gacagcgagatcctcacctccgccaaagacagcgttgccaaatccttccctgacgcagag
tacttctga
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