Leclercia sp. LSNIH1: C2U54_08235
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Entry
C2U54_08235 CDS
T05297
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lei
Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_08235
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C2U54_08235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
RecA_N
Rad51
AAA_22
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
nSTAND_NTPase5
AAA_14
AAA
AAA_16
nSTAND3
AAA_24
NTPase_1
DZR
cobW
Zeta_toxin
Viral_helicase1
AAA_29
PAXNEB
Herpes_Helicase
NACHT
Motif
Other DBs
NCBI-ProteinID:
AUU83995
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Position
1632348..1633733
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AA seq
461 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRGVAASPTVARNERLSGYAGNAG
VSKVQKLSDISLEALPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKL
AAQMKTLYVTGEESLQQVAMRAHRLGLPTSELNMLSETSIEQICMIAEEEQPKLMVIDSI
QVMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIIMVGHVTKDGALAGPKVLEHCIDC
SVMLDGDADTRLRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSS
VMVVWEGTRPLLVEIQALVDHSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVF
VNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEA
AKHGFRRAIVPAANVPKKVPEGMKVFGVKKLADALNVFDDL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagctccaaaacgcgcatttgtctgtaatgaatgtggtgcggattatccgcgc
tggcaggggcagtgcagcgcctgtcatgcctggaacaccatcaccgaagtgcgcggagtt
gccgcttcacccaccgttgcccgtaacgagcgtctgagcggttatgcgggcaacgcaggt
gtatcgaaagtccagaagctctcagacatcagccttgaagccctgccgcgcttctcaacc
ggttttaaagagtttgaccgggtgctgggcggcggcgtggtgccgggcagcgccattctg
attggcggaaacccgggcgccgggaaatcgaccctgctgctgcaaaccctctgcaagctc
gcggcgcagatgaaaacactctacgtcaccggggaggagtcgctgcagcaggtggcgatg
cgtgcccaccggctggggctgcccaccagcgagctgaatatgctctccgaaaccagcatc
gagcagatctgcatgattgctgaagaagagcagccgaagctgatggtgatcgactccatt
caggtgatgcacatggccgatatccagtcgtcgccggggagcgtcgcccaggtgcgcgaa
actgccgcctacctgacgcgctttgcgaaaacgcgcggcgtggcgatcatcatggtcggc
cacgtcaccaaagatggcgccctggcggggccgaaagtgctggagcactgtatcgactgc
tccgtgatgctggatggcgatgccgatacccgtttacgtaccctgcgcagccataagaac
cgctttggcgcggtgaatgagctgggcgtctttgccatgaccgagcaggggctgcgtgaa
gtgagcaacccgtccgccatcttcctgagccgcggcgacgaagtcacctccggcagctcg
gtaatggtggtctgggaagggacgcgcccgctgctggtggagatccaggctctggtcgat
cactcgatgatgggcaatccccgtcgcgtggcggtggggctggagcaaaaccgtctggca
attttgctggcggtgctgcaccgtcacggcggcctgcagatggcggatcaggatgtgttt
gtcaacgtggtcggcggcgtgaaggtcaccgaaaccagtgccgacctggcgctgctgctg
gcgatggtctccagcctgcgcgaccgtccgttgccgcaggatctggtggtctttggcgag
gtcggtctggctggcgaaatccgcccggtaccgagtggtcaggagcgcatctccgaggcg
gcaaaacatggcttccgccgggcgattgtccccgccgccaacgtgccgaaaaaggtgccg
gaagggatgaaggtctttggcgtgaaaaaacttgctgatgcgttaaatgtctttgacgac
ttataa
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