Leclercia sp. LSNIH1: C2U54_09165
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Entry
C2U54_09165 CDS
T05297
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03030
DNA replication
lei03430
Mismatch repair
lei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U54_09165
03430 Mismatch repair
C2U54_09165
03440 Homologous recombination
C2U54_09165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lei03032
]
C2U54_09165
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_09165
Enzymes [BR:
lei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U54_09165
DNA replication proteins [BR:
lei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U54_09165
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U54_09165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUU84172
LinkDB
All DBs
Position
1841607..1845089
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPVIGADFHVQSELLADEMTQITVLALNNTGYQNLTLLISRAYQRGYGPQGPWIDRAW
LAELNEGLLLISGGRMGDVGRCLLRGNTALVEQCVDFYKEYFPDRFYLELIRTGRPDEES
YLHAAVALAEEQGLPVVATNDVRFINADDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAEKRPEYDERLDVELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDESGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQTVLDGERETLGLY
LTGHPINQYIKEIERYVGGYRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGASWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgattgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgacttcactaacctgtgcggtctggtgaagttctacggaacggcgcacggtgcc
ggaatgaagccggtaattggggctgattttcatgtacagagcgagcttctcgccgatgaa
atgacgcaaattaccgtcctggcgctgaacaataccggctatcagaacctgacgctgctc
atctcccgtgcctatcagcgcggctacggcccgcagggcccgtggatcgatcgcgcgtgg
ctggcggagctgaatgaggggctgctgctcatctccggcgggcgcatgggcgacgtaggc
cgatgcctgctgcgcggcaacactgccctggtggagcagtgcgtcgatttttataaagag
tatttcccggatcgcttctacctggagctgatccgtaccggtcgccctgatgaagagagc
tatctgcatgccgcggtggcgctggcggaagagcagggcctgccggtagttgccaccaac
gatgtgcgcttcatcaacgccgacgattttgacgcccatgaaattcgcgtcgctatccac
gatggttttaccctcgacgatccgaaacgcccccgcaactattcgccgcagcaatatatg
cgcagcgaagaggagatgtgcgagctgttttccgatatcccggaagcgctggagaacagc
gtagagatcgccaagcgctgtaacgtcaccgtccgtctgggtgaatacttcctgccgcag
ttcccgaccggcgacatgaccaccgaagacttcctggtcatgaaatcaaaagaaggtctg
gaagagcgccttgagtttctgttcccggatccggccgttcgcgccgagaagcgcccggag
tatgacgagcgtctggacgttgagctccaggttattaaccagatggggttccccggctac
ttcctgatcgttatggagtttatccagtggtcgaaagacaacggcgtaccggtagggccg
ggccgtggttcgggtgccggatcgctggtggcctatgcgctgaaaattaccgatctcgat
ccgctggaatttgacctgctgttcgaacgcttcctcaacccggaacgtgtctccatgccc
gacttcgacgttgacttctgtatggagaaacgcgaccaggtcattgaacacgtggcagac
atgtacggtcgtgacgcggtatcgcagatcattaccttcggtaccatggcggcaaaagca
gttatccgcgacgtgggccgcgtactggggcatccgtacggctttgttgaccgcatctcg
aagctggtgccgcctgacccgggcatgaccctggcgaaagcgttcgaagcggagccgcag
ctgccggaaatctacgaggcggatgaagaggtcaaagcgctgatcgacatggcgcgcaag
ctggaaggtgtcacccgaaacgccggtaaacacgccggtggggtggtcattgcaccgacc
aaaattaccgactttgcgccgctctactgcgatgaatcgggcctgcatccggtcacccag
tttgacaagaacgacgtggaatacgccgggctggtgaagtttgacttcctcggcttgcgt
acgctcaccatcatcgactgggcgttgaagatgatcaacccgcgccgggccaagcagggc
ctggagccgattgatatcgccgcgatcccgctcgatgacaagaaaagtttcgacatgctg
caacgctcggagaccacggcggtcttccagcttgaatcccgcggcatgaaagatttgatc
aagcgtctgcagcctgactgcttcgaagatatgatcgcgctggtggcgctgttccgtccg
gggccgctgcagtccgggatggtagataactttatcgaccgtaagcatggccgcgaggaa
ctctcctatccggatgttcagtggcagcatgaaagcctgaagccggtgctggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagatcgcccaggtgctctccggctac
accctcggcggcgcggatatgctgcgtcgagcaatgggtaagaaaaagccggaagagatg
gccaagcagcgctctatatttgaagatggggcgaagaaaaacggcatcgacggcgaactg
gcgatgaaaatcttcgatctggtggagaaatttgccggatacggatttaacaagtcacac
tccgccgcctacgcgctggtctcctatcagacgctgtggctgaaggcgcactacccggcc
gagtttatggccgcggtaatgaccgccgatatggacaacaccgagaaggtggtcggtctg
gtggatgagtgctggcgcatggggctgaaaatcctgccgcctgacatcaactccggtcag
taccacttccacgtcaatgacgacggggagattgtctacggcatcggcgcgattaaaggg
gtgggtgaagggccgatcgaagcgatcatcgaagcccgtaaccagggcggctacttccgc
gagctgtttgacctctgtgcgcgtaccgatattaaaaagctcaaccgccgggtgctggaa
aagctgattatgtccggggcgttcgatcgtctcgggccgcatcgcgcggcgctgatgaac
tcgctgggggacgccctgaaggccgccgaccagcactcaaaagccgaggccattgggcag
gcggatatgttcggcgtgctggcagaagagccggagcagattgaacaatcctatgccagc
tgtcagccgtggccggaacagaccgtgctggatggtgagcgcgagacgttaggcctgtat
ctgaccgggcatccgatcaatcagtatattaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgacagaacgtggtaagattactacggctgcggggctcgtc
attgctgcgagggttatggtcaccaaacgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcggctggaggtgatgttattcaccgacgcgctggataaataccagcag
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
gggggacttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcacggttgcgctttggtgcgtcgtggcgtgtctctccgagcgat
cgtttactgaacgatctacgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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