Leclercia sp. LSNIH1: C2U54_12105
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Entry
C2U54_12105 CDS
T05297
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei00900
Terpenoid backbone biosynthesis
lei01100
Metabolic pathways
lei01110
Biosynthesis of secondary metabolites
Module
lei_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C2U54_12105
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lei01006
]
C2U54_12105
Enzymes [BR:
lei01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
C2U54_12105
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
C2U54_12105
2.5.1.29 geranylgeranyl diphosphate synthase
C2U54_12105
Prenyltransferases [BR:
lei01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
C2U54_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AUU84705
UniProt:
A0AAD0DE05
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All DBs
Position
2455704..2456624
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AA seq
306 aa
AA seq
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MTHSHEDDVKMLLSAFEQRLEQLLPAGEQEGQVYAAMRDATLVAGKRMRPLLLLLAARDM
GYKTEPTGILDLACAIEMVHVASLILDDMPCMDNATLRRGRPTVHYQYGEHVAILAAVAL
LSHAFCVISRTPSLTHEAKARAIAELSASVGHMGLVQGQFRDLNEARQNRNTDEILLTNE
LKTSSLFNATLQLAAIAADAPPPVSERLRFFARDLGQAFQLIDDLTDGSSANGKDPHQDK
DKSTLVAVLGAESVFLRLREHVRSADQHIATACQPGNTARYYVHIWFEKQLTLISQSLSL
SLSECQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagtcatgaagatgatgtgaaaatgctgctgtctgcgtttgagcaacgtctc
gaacaacttttgcctgcgggagagcaggaagggcaggtctatgcggccatgcgcgatgcc
acgcttgtcgcgggcaagcgcatgcgccctctgttgctgctgctggcggcgcgggatatg
ggctacaaaacagagccgacgggcattctcgatctggcctgcgccattgagatggtccat
gtcgcctccctgatcctggatgacatgccctgcatggacaacgctacgctccgccgcggg
cggcctacggttcactaccagtatggcgaacacgtggcgattctggcggcggtggcgctg
ctcagtcacgctttttgcgtcatctcccgcacgccttcgctgacccacgaggcaaaagcg
cgggcgattgctgagctctctgcctccgtggggcatatggggctggtgcagggacaattc
cgcgatctcaatgaggctcgccagaaccgaaacaccgatgagatcctcctgaccaatgag
ctgaaaaccagcagcctgtttaacgccaccctgcaactggcggcgattgcggccgacgcg
ccacctccggtcagcgaacggttgcgcttttttgcccgcgatctcggccaggccttccag
ctgattgatgacctgaccgatggctccagtgccaacggcaaagatccgcatcaggataaa
gacaaatcgacgctggttgccgtgctcggggcagagagtgtcttcctgcggctgcgcgag
cacgtgcgcagcgccgatcagcatattgctaccgcctgtcagccgggaaataccgcccgc
tactatgttcacatctggtttgaaaaacagctgacgcttatcagccagagcctgtcatta
tccctgtcggagtgtcaatga
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