Leclercia sp. LSNIH1: C2U54_12560
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Entry
C2U54_12560 CDS
T05297
Name
(GenBank) lipid ABC transporter permease/ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C2U54_12560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lei02000
]
C2U54_12560
Enzymes [BR:
lei01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
C2U54_12560
Transporters [BR:
lei02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C2U54_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
DEAD
AAA_16
AAA_22
AAA_25
DUF87
AAA_29
nSTAND3
RsgA_GTPase
AAA_18
APS_kinase
HUTI_composite_bact
Activator-TraM
AAA_30
SLFN-g3_helicase
AAA_15
MMR_HSR1
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AUU84789
UniProt:
A0AAD0DEB1
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All DBs
Position
2558428..2560176
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AA seq
582 aa
AA seq
DB search
MHNDKDLSTWQTFRRLWPVIAPFRTGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTD
RSVLLWMPLVVIGLMILRGITSYISSYCLSWVSGKVVMTMRRRLFSHMMGMPVAFFDKQS
TGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFALMFWYSWQLSLILIVLAPIVSI
AIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQELETKRFDKVSNKMRLQ
GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIERSTGDVEFRNVTFTYPGRDTPALR
NINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILIDGHDLREYTLRSLRNQVA
LVSQNVHLFNDTVANNIAYARNEEYSREQIEAAARMAYAMDFINKMDNGLDTIIGENGVL
LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEKADEIVVVEDGYIVERGSHADLLAHQGVYAQLHKMQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgacaaagatctctccacgtggcagaccttccgccgactctggccggtgatt
gcacccttcagaacgggcctaatcgtggcgggcgtagcgttaatcctcaacgcagccagc
gataccttcatgttatcgctcctcaaaccgttactggacgacggttttggtaaaacggat
cgctcagtgttgctatggatgccgctggtggttatcggcctgatgattttacgcggcatc
accagctatatctccagctactgcctctcctgggtttcgggcaaagtggtgatgaccatg
cgccgccgcctgttcagccatatgatgggcatgccggtcgcgttttttgacaagcagtcg
accggcactctgctgtcgcgcattacttacgactccgagcaggtggcttcctcctcctcc
agcgcgctgatcaccgttgtgcgtgaaggggcgtcgattattggtctgttcgccctgatg
ttctggtacagctggcagctgtcgctgatcctgattgtgctggcgccgattgtgtcgatt
gcgatccgcgtcgtctcgaagcgtttccgcagcatcagtaagaacatgcagaacacgatg
gggcaggtgaccaccagcgccgagcagatgctgaaaggccacaaagaggtgctgattttt
ggcggccaggagctcgaaaccaagcgcttcgataaggtcagcaataagatgcgtctgcag
gggatgaagatggtgtctgcttcttccatctccgatccgatcattcagcttatcgcctcc
ctggcgctggcgtttgtgctctatgccgccagcttcccgagcgtgatggaaaccctcacc
gccggtaccattaccgtggtcttctcgtcgatgattgccctgatgcgcccgctgaaatcg
ttaaccaacgttaacgcccagttccagcgcgggatggcagcctgccagacgctgtttgcg
atccttgattccgaacaggaaaaagacgaaggcaaacgcgtgattgagcgctcaaccggc
gacgtggagttccgcaatgtgacctttacctatccgggtcgtgatacgcctgctctgcgc
aatatcaatctgaaaattccggcaggcaagaccgtggccctggtgggccgttctggctcg
ggtaaatcgaccatcgccagcctgatcacccgcttctacgatattgatgagggtgagatc
ctgattgatggccacgatctgcgcgagtacaccctgcggtcgctgcgtaatcaggtcgcg
ctggtctcccagaatgtgcacctgttcaacgacaccgtggctaataacatcgcctatgcc
cggaatgaagagtacagccgtgagcagatcgaagcggcggcgcggatggcctacgccatg
gacttcatcaataagatggataacggcctggataccattatcggtgaaaacggtgtcctg
ctctccggcggtcagcgccagcgtatcgctattgcgcgcgcgctgctgcgtgacagccca
atcctgatcctcgatgaagccacctcggcgctggataccgagtccgaacgcgctatccag
tctgcgctggatgagctgcagaagaaccgtacctcactggtgattgcccaccgcctgtcg
acgattgaaaaagccgacgaaatcgtggtggtggaagatggctacatcgtcgaacggggc
agccacgccgacctgctggcgcaccagggcgtatatgctcagcttcataaaatgcagttt
ggcgaatga
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