Leclercia sp. LSNIH1: C2U54_13605
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Entry
C2U54_13605 CDS
T05297
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03030
DNA replication
lei03430
Mismatch repair
lei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U54_13605 (holB)
03430 Mismatch repair
C2U54_13605 (holB)
03440 Homologous recombination
C2U54_13605 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lei03032
]
C2U54_13605 (holB)
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_13605 (holB)
Enzymes [BR:
lei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U54_13605 (holB)
DNA replication proteins [BR:
lei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U54_13605 (holB)
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U54_13605 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
AUU84973
LinkDB
All DBs
Position
2755224..2756228
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPHLEQLVNSYQSGRGHHALLIQSLPGMGDDALIYAISRFLMCQQPQGHKSCG
QCRGCQLMQAQTHPDYYALEPEKGKTTLGIDAVRAVSEKLYERARLGGAKVVWVKDAAQL
TEAAANALLKTLEEPPENTWFLMACREPGRLLATLRSRCRLHHLNVPQEAWAISWLAREV
TTSQEAALSALRLCGGAPAAALALLQPNVWGQREQLCQALGAVPDSGDWMSLLSVLNHEQ
APDRLHWLAALLLDALKIQQGATLISNADAWQLVNSLARRLPGVALRAILHDVCQCREQL
LSVTGLNRELVLTDLLLTIEHYLQPGTTLPVSHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccatggttgcgcccgcacttagaacagctggtgaacagctatcagtcc
ggtcgggggcatcatgcgttactgatccagtcgctgccgggaatgggcgatgatgcgctg
atctacgctatcagccgttttctgatgtgccagcaaccccaggggcataaaagctgtggc
cagtgccgcggctgtcagttgatgcaggcgcagacgcacccggattattacgcgcttgag
ccagagaagggcaaaacgacgctgggtattgatgcggttcgcgcggtcagcgagaagctc
tacgagcgcgcgcggcttggcggggcgaaagtggtctgggtcaaggatgccgcccagctg
accgaagctgcggccaacgcgctgttaaaaaccctggaagagccgccggaaaatacctgg
ttcctgatggcctgccgtgagcccggacggttgctggcgactctccgaagccgctgtcgc
ttgcatcatctcaacgtgccgcaggaggcgtgggctatcagctggcttgcgcgagaagtg
acaacgtcacaagaagcggcgctcagcgcgctgcgtttgtgcggcggcgcgcctgcagcc
gcgctggcgctgttgcagcccaacgtctggggacaacgcgaacagctttgccaggcgctt
ggggctgtacctgacagtggtgactggatgagtctgctgtcggtgctcaatcatgaacag
gcgcccgatcgtctgcactggctggcggcattgttgctggatgcccttaaaattcagcag
ggggcgaccttgatcagcaatgccgatgcctggcagctggtaaacagcctcgcccggcgc
ctgccaggagtggcattacgggctatccttcatgacgtatgccagtgtcgcgaacaatta
ctcagcgtaacggggctgaatcgggagcttgtgctgaccgacctgttactcactatcgag
cattacctgcaaccgggcacaacgctgcctgtatcccatctctga
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