Leclercia sp. LSNIH1: C2U54_17890
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Entry
C2U54_17890 CDS
T05297
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lei
Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lei03016
]
C2U54_17890
Enzymes [BR:
lei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2U54_17890
Transfer RNA biogenesis [BR:
lei03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U54_17890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
AUU85772
UniProt:
A0AAD0GGF5
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All DBs
Position
3612655..3614589
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
TAVIHSEKDRESAEPEELIEPFLTRFVGKVLRKDDRLSIIPDHPLLKDAIPCRAERGVTH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGEDHFVPWWVTLARHNLEKEAPEGAAT
DMLDEGLERRDLTALNFVTIDSASTEDMDDALYVEEQADGKLLLTVAIADPTAWIAEGTP
LDDAAKIRAFTNYLPGFNIPMLPRELSDNLCSLRANEVRPVLACRMSIAADGTIEENIEF
FAALIESKAKLVYDEVSDWLENSGSWQPEHEAIADQIRLLHRVCLSRSEWRKTHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFD
PANSEALAALLKTHDVHVDPQEVLTLNGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIVKGETIARPQDEATVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTETRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVAYKVTEVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgtgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaagtcgatgcg
cagaaaagttacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgcatt
acggccgtgatccatagcgaaaaggatcgtgaatcagccgagcctgaagaattaattgaa
ccgttcctgacccgttttgtgggtaaggtgctgagaaaagatgaccgtctgtccatcatt
ccggaccatcctctgctgaaagacgccattccctgccgcgctgagcgtggcgtgacgcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcatcctctgaagggcgat
cgcggtttttatgccgaactcacccagtttatcaccttcggtgaagaccatttcgtaccg
tggtgggtcacccttgcccgccataatctggaaaaagaggcgccagaaggcgcagcgact
gacatgctggacgaaggtcttgagcgtcgcgatctgactgcactgaattttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgttgaagagcaggctgacggt
aaactgctgctaaccgtagcgattgccgatcctacagcctggatcgcggaaggtaccccg
ctggatgacgcggcgaaaatccgtgcctttaccaactatctgccaggcttcaacatcccg
atgctgccgcgcgagctgtcggataatctctgctcgctgcgcgctaacgaagtgcgcccg
gtactggcctgccgcatgtccatcgctgccgatggcactatcgaagagaacattgagttc
tttgctgcgctgatcgagtctaaagccaagctggtgtacgacgaggtctctgactggctg
gaaaacagcggtagctggcagcctgagcatgaggccattgccgaccagatccgcctgctg
caccgtgtctgtctgagccgtagcgaatggcgtaagacccatgcgctggtctttaaggat
cgccctgactaccgtttcattctcggtgagaaaggcgaagtgctggatatcgtggcggag
ccgcgtcgcattgctaaccgcatcgttgaagagtcgatgattgcggcgaacatctgtgcg
gcccgcgtactgcgcgacaaactcggtttcggtatctataacgtgcataccgggtttgat
ccagctaacagcgaagccctggcggccctgctgaaaacccatgacgtgcatgtggatccg
caggaagttctgaccctgaatggcttctgcaagctgcgccgtgaactggatgcccagcca
tctggtttcctggatagccgcattcgtcgcttccagtctttcgctgagatcagcaccgaa
cctggcccgcactttggtcttgggctggaagcctacgccacctggacctcaccgattcgt
aagtatggcgatatgattaaccaccgcctgctgaaagcgatcgttaaaggcgaaaccatt
gcccgtccacaggacgaagccacggtgcagatggccgagcgccgtcgccttaaccgcatg
gcggaacgcgacgtcggtgactggctctacgcccggttcctgaaagacaaagccggaacg
gagacccgtttcgcggcggagatcatcgatgtcagccgtggcgggatgcgtgtacgtctg
gtggataatggcgccgtggcctttattcctgcgccgttcctgcacgccgtacgtgacgag
ctggtctgcagccaggaaaacggcaccgtgcaaatcaagggcgaagtggcctataaagtg
accgaagttatcgacgtcactattgctgaagtgcgcatggaaacacgcagcattattgcc
cgccctgccgtctga
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