Leclercia sp. LSNIH1: C2U54_22360
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Entry
C2U54_22360 CDS
T05297
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
lei
Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lei03009
]
C2U54_22360
Enzymes [BR:
lei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2U54_22360
Ribosome biogenesis [BR:
lei03009
]
Prokaryotic type
rRNA helicases
C2U54_22360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AUU86580
UniProt:
A0AAD0DHN4
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All DBs
Position
4536179..4537507
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQEAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADDIQHKTALLI
HLLKQPEATRSIVFVRKRERVHELATWLREAGINNCYLEGEMVQIKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNFDLPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
QKIGRYVEEPLKARVIDELRPSTRAPSEKMTGKPSKKVLAKRAEKKAKEKEKPRVKQRHR
DTKNVGKRRKPSGSAPVTQKEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagccttctggacgcgctccag
gaaaaaggcttcacacgcccgaccgctattcaggaagcggcaattccgcctgcactggag
ggccgtgacgtgctcggttctgcgccaaccggcacgggtaaaacggcagcctatttgctg
cctgcgttgcagcatctgctggattttccgcgtaagaaatcaggtccgccgcgtattctg
atcctcaccccgacccgtgaactggcgatgcaggttgccgatcatgcccgtgagctggcg
aagaatacccacctggatatcgcaaccattaccggcggtgtggcctatatgaaccacgcc
gaagtattcagtgagaaccaggatatcgtcgttgcgacgaccgggcgtctgctgcaatac
atcaaagaagagaacttcgactgccgtgcggttgaaaccttaattcttgacgaagctgac
cgtatgctggatatgggctttgcgcaggatatcgaacacattgccggtgagacccgctgg
cgtaagcagactatgctcttctccgcgacgctggaaggcgatgcaattaaagattttgct
gagcgtcttctggaggacccagttgaggtttccgccaccccgtccacccgcgagcgcaag
aagatccatcagtggtactaccgcgccgatgatattcagcataaaaccgcgctgctgatc
cacctgctgaaacagcctgaagccacccgctctatcgtctttgtacggaaacgtgagcgt
gtgcacgagctggcgacctggctgcgtgaagcgggtatcaataactgctatctcgaaggc
gagatggtgcagattaaacgtaacgaagcgatcaaacgtctgaccgatggccgcgtgaac
gtgctggtggcgaccgacgttgctgcgcgcggtattgatattcctgatgtcagccacgtg
ttcaacttcgatctgccgcgcactgcggatacctatctgcaccgcattggccgtaccggt
cgtgccgggcgtaaagggacagccatttcgctggtcgaagcgcatgaccatctgctgctg
caaaaaattggtcgttacgttgaagagccgctgaaggcccgcgtgatcgacgaactgcgt
ccgagcacccgtgcgccgagcgaaaaaatgacgggcaaaccgtccaagaaagtgctcgct
aaacgtgccgagaaaaaggcgaaagagaaagagaaaccgcgcgtgaagcaacgccaccgt
gataccaaaaacgtgggcaagcgtcgtaagcctagcggcagcgcgccggtgacacagaaa
gaagagtaa
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