Leclercia sp. LSNIH1: C2U54_22370
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Entry
C2U54_22370 CDS
T05297
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2U54_22370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_22370
Enzymes [BR:
lei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C2U54_22370
DNA repair and recombination proteins [BR:
lei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2U54_22370
Prokaryotic type
C2U54_22370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUU86582
LinkDB
All DBs
Position
4538257..4538946
Genome browser
AA seq
229 aa
AA seq
DB search
MTAPLTWHDVLADEKKQPYFVNTLNTVAAERQDGITIYPPQKDVFNAFRFTELADVKVVI
LGQDPYHGPGQAHGLAFSVRPGVAIPPSLLNMYKELEASVPGFTRPSHGYLESWARQGVL
LLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGSIIDTQRH
HVLKAPHPSPLSAHRGFFGCNHFVLANEWLEKQGETPIDWMPELPAESE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacctttaacctggcacgacgtactggccgatgaaaaaaaacagccttacttc
gttaatactctgaataccgtcgccgcggaacgtcaggacggcatcaccatctatccgccc
cagaaagatgtgttcaacgcctttcgttttaccgagctggcagatgtcaaagtggttatc
ctgggacaggatccctaccacggaccgggtcaggcacacggcctggcgttttctgtgcgt
ccgggcgttgctatccccccttccctgctgaatatgtataaggagctggaagcctccgta
ccggggtttacccgaccttcacatggttacctggaaagctgggcgcgtcagggcgttctg
ttgctcaacaccgtgctgacggttcgcgccgggcaggcccattctcatgccagcctcggg
tgggagacatttaccgacaaggtcatcagcctgattaaccagcaccgggaaggcgtggtc
tttttgctctggggatcgcatgcgcagaagaaagggtcgatcattgatactcagcgccat
catgtgctgaaagcgccgcacccgtcaccgctgtcagcccatcgcggcttttttggctgc
aatcattttgtgctggcgaatgagtggctggagaaacagggcgaaacgccgattgactgg
atgccggagttaccggctgaaagcgagtaa
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