Leclercia sp. LSNIH1: C2U54_23350
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Entry
C2U54_23350 CDS
T05297
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lei
Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lei03016
]
C2U54_23350
Enzymes [BR:
lei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C2U54_23350
Transfer RNA biogenesis [BR:
lei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C2U54_23350
Prokaryotic type
C2U54_23350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUU86761
UniProt:
A0AAD0GGJ9
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All DBs
Position
complement(4745744..4746793)
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AA seq
349 aa
AA seq
DB search
MTDFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNGMPDLSQFQLEGCQVLEYARHKRK
LRLGALKGNAFTLVLREVSNRDEVEQRLNAIQAQGVPNYFGAQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDANQVVVGDALQLAGRGSWFVATDEE
LRDVQARVEAKTLMITAALPGTGDWGPQGDALRFEQSAIADETELCSLLGREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttcgacaacctgacctacctgcacggtaaaccgcagggtacggggctgctg
aaagccaacccggaagattttgtggtcgtcgaggatttggggttcgagccggatggcgag
ggcgagcacattctggtgcggatcctgaagaatggctgtaacacccgttttgtggccgat
gcgctggcaaagttcctgaaaattcacgctcgtgaagtaagcttcgccgggcagaaagac
aaacacgccgtgacggaacagtggctctgcgcgcgggtgccgggtaacgggatgcccgat
ttaagccagttccagctcgaaggctgccaggtgctggaatatgcccgccataagcgcaag
ttgcgcctcggcgcgttaaagggcaacgcctttaccctggtgctgcgcgaggtaagcaac
cgcgacgaggtagaacagcgtcttaacgccatccaggcgcagggtgtgccgaactacttt
ggcgcgcagcgttttggcatcggcggcagtaacctgcagggggcgctacgctgggcgcag
agcaatgccccggtgcgcgatcgcaataaacgcagtttttggttgtcggcagcccgcagc
gcgttgtttaatcaaatcgtcagcgagcgactgaaaaaaacagacgcgaatcaagttgtt
gtcggcgatgcgctacaattagcgggacgcggcagctggtttgtcgccactgacgaagag
ctgcgcgatgtgcaggcgcgcgtcgaggcaaaaacgctgatgatcactgcggccctgccg
ggtaccggcgactggggtccgcagggtgatgcgctgcgctttgaacagtctgccatcgcc
gatgaaacagagttatgctcactgctggggcgggaaaaagtcgaagcggcacgccgggcg
atgctgctctatccgcaacagttgagctggaactggtgggatgacgtaaccgtcgagcta
cgtttctggctgccggcaggcagctttgccaccagtgttgtcagggaacttatcaacact
tcgggtgactatgcgaatattgctgagtaa
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