Leclercia sp. LSNIH1: C2U54_23620
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Entry
C2U54_23620 CDS
T05297
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U54_23620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lei03400
]
C2U54_23620
Enzymes [BR:
lei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2U54_23620
DNA repair and recombination proteins [BR:
lei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U54_23620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
MukB
AAA_28
UvrD_C
PhoH
Herpes_Helicase
DO-GTPase1
CbiA
ATPase
T2SSE
Phageshock_PspD
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AUU86808
UniProt:
A0AAD0GGR2
LinkDB
All DBs
Position
complement(4802999..4804819)
Genome browser
AA seq
606 aa
AA seq
DB search
MTMQEHLLEAVEQRVLRRLDVQFAMMVAGNDEPAVMLAAAILSRDAGEGHVCLPLSRLRA
EAKSAAMQACFALFDQEPDWTATLLRSRAVSAGDEPTPLVLTGERLYLNRMWRYERAVAR
FFSEANQPLPHDSADVQRTLNALFTSDESVNWQKVAAAVALTRRISVISGGPGTGKTTTV
ARLLAALIQMAGEEKCRIRLAAPTGKAAARLTESLGGALQKLPLTEAQRARFPTEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTWASAGFTVRRAQELASMTGCEMEGNVSPVAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHAIRSVFDGKFSDIEKKQLQSGEEYLAMLEDALQGYQHFLDS
VQQQASEAEILAAFGRYQLLCALRDGPFGVAGLNEKLEQVLAQKRRIGRQPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGQGLRVWFQMPDGSVKSVQPSRLPEHETAWAMTVHKS
QGSEFDHAALILPNQMSPVVTRELVYTAITRARRRLSLYADEGVLTQAVTTRTERRSGLS
AIFEAL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggaacacttgctggaagccgtagagcagcgcgtgctgcgtcgtctggat
gtacagtttgcgatgatggtagcagggaacgacgaaccggcggtgatgctggcggcggca
atcttaagccgtgatgcgggagaagggcacgtttgcctgccgttgtcccggctgcgtgcc
gaggcgaaaagcgccgcgatgcaggcctgttttgcgctgtttgaccaggagccggactgg
accgctacgctgctgcgctcccgcgcggtgagtgcaggggatgaaccgacgccgctggtg
ctcaccggcgaacggctctacctcaaccggatgtggcgctatgagcgggcggtggcccgc
ttctttagcgaagccaaccagcctttgccccatgacagcgccgacgttcagcgcacgctg
aatgcgctgttcacctctgatgaatccgtcaactggcaaaaggtggctgcggcagtcgcg
ttaacgcggcgtatttccgtgatctccggcgggccggggaccggcaaaacgaccaccgtt
gcccgcctgctggcggcgctgatccagatggcgggagaggagaaatgccggatccggctg
gcggcccccaccggtaaagcggccgctcgtctgaccgaatccctgggcggcgcgctgcaa
aaactgcccctgaccgaggcccagcgcgcgcgattcccgacggaagcgagtacgctgcac
cgtttgcttggcgcgcagccgggcagccagcgcctgcgttaccatgcaggtaatccgctg
cacctggatgtgctggtggtggatgaggcgtcgatgattgatctgacgatgatgtcgcgt
ctgatcgatgccctgccgcctcatgcccgggttattttcctcggcgatcgcgaccagctg
gcctccgtcgaagcgggcgcggtgctgggtgacatctgtacctgggccagcgccggcttt
acggtccggcgcgcgcaggagcttgccagcatgacgggatgcgagatggagggcaacgtc
agcccggtcgcgggtgcgctacgcgacagcctgtgcctgctgcaaaaaagctaccgtttt
ggcagcgattctggcatcgggcaactggcggccgcggtcaaccggggcgatcgccacgct
atccgctcggtatttgatggcaaattcagtgatattgagaaaaagcagctccagagcggg
gaagagtatctggcgatgctggaagatgccctgcaggggtatcaacattttctcgacagc
gtgcagcagcaagcctccgaagcggagatcctggcggcatttggccgctaccagctgctt
tgcgccttacgggatggccccttcggcgttgccgggctcaatgaaaagctcgagcaggtc
ctggcgcaaaaacgccgtattggccgtcagccgcattcacgctggtatgaaggcaggccg
gtgatgatttcacgtaacgacagcgcgctgggcctgtttaacggcgatatcgggattgcg
ctggaccggggtcaggggctgcgcgtctggttccagatgccggatggcagcgtgaagtcc
gtgcagcccagccgcctgccggaacatgaaaccgcctgggccatgacggtgcataaatcc
cagggctctgagttcgatcacgcggcgctgattttacctaaccagatgtcgcccgtcgtg
acccgcgagctggtctataccgccattacccgcgcccgtcggcggttgtcgttgtatgcg
gatgaaggggtgctgacccaggctgtcactacccgtacagagcgacgcagcgggctgagc
gcgatttttgaagccttataa
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