Leifsonia sp. PS1209: HF024_03510
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Entry
HF024_03510 CDS
T06547
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF024_03510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leif03019
]
HF024_03510
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_03510
Enzymes [BR:
leif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF024_03510
Messenger RNA biogenesis [BR:
leif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HF024_03510
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HF024_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_Cmi2_C
DprA_WH
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QIZ97681
UniProt:
A0A6H1W491
LinkDB
All DBs
Position
complement(710184..712286)
Genome browser
AA seq
700 aa
AA seq
DB search
MSTTSTTRDQAVDTLRALVGDSQADFHDGQFEAISALVDDRRRALVVQRTGWGKSAVYFV
ATMVLRSRGAGPTILVSPLLALMRDQVAAAERAGVRAVTLNSANRHEWDDVSQRLRDDTV
DALLVSPERLNNPQFRDEFLPDLIARSGLLVIDEAHCISDWGHDFRPDYRRLRDLIATMP
DGVPVLATTATANERVVADVAEQMGTGSHEDVLTIRGPLARRSLRLGVLTLPDAGARLAW
LVSNLERLPGSGIVYALTVSAAEDTARLLRQAGHETYAYTGQTDTAEREDLEGRLKRNEV
KALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATENADVLLLPGQEDRAI
WDYFATASMPSEAKADAVLGALHSEPQSTRALESQVDLRPSTLELLLKVLDVDGAVKRVA
KGWISTGTPWTYDRERYERIAAARTAEQQSMLDYESTGECRMMFLQRALDDPDAQPCGRC
DNCAGAWYPAAINDSASSSVASALDRVGVEIEPRKLWPTGADRLGVPVKGKIGQDEQLEP
GRALARLTDLGWGGPLRELLGPGAVDQPCPPALLAACIRVLADWNWAERPAAVVAMPSRR
RPQFVQSLARGFADAGRLPFAGTLDLVDGGPSGEAGGNSAFRLSSVWNRFSADALDLPQG
VPVLLVDDLVDSRWTITVAGRTLRQAGASAVLPFAAALRA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccagcaccacacgagaccaggccgtcgacaccctccgcgccttggtcggc
gattcacaggccgacttccacgacgggcagttcgaggcgatctccgcgctcgtcgacgac
cgtcggcgcgccctggtggtgcaacggacgggctggggcaagtcggcggtgtacttcgtc
gccacgatggtgctgcgctcccggggcgccggccccaccatcctggtgtccccgctgctc
gcgctcatgcgcgatcaggtggcggcggccgaacgcgcgggggtgagggctgtcaccctc
aactccgcaaaccgccacgagtgggacgacgtctctcagcgcctccgcgacgacacagtg
gatgcgctgctcgtctcccccgagcggctcaacaacccgcagttccgcgacgagttcctg
ccagacctcatcgcccgcagcggcctgctggtgatcgacgaggcccactgcatctccgac
tggggccacgacttccggccggactaccggcggctgcgcgacctcatcgccacgatgccg
gacggcgtgcccgtgctcgccaccacggccaccgccaacgaacgcgtggtggccgacgtg
gcggagcagatgggaacgggcagtcacgaagacgtgctcaccatccgcgggccgctggcc
aggcgctcgctgcgcctcggcgtgctcacgctgccggatgccggcgcccggctcgcctgg
ctggtcagcaacctggaacggctgccgggcagcggcatcgtctacgccctcacggtgtcc
gctgcggaggacaccgctcgcctgctgcggcaggccgggcacgagacatacgcgtacacc
ggccagaccgatacggcggagcgcgaagacctggaagggcggctgaagcgcaacgaggtg
aaggcgctggtcgccacgagcgcactcggcatggggttcgacaaacccgacctcggcttc
gtcgtgcacctcggcgccccgtcctcgcccgtcgcctactaccagcaggtcggccgcgcc
gggcgtgccacggagaacgccgacgtgctgctcctgcccgggcaggaggacagggcgatc
tgggactacttcgccaccgcatccatgccgtcggaggcgaaggcggacgccgtgctcggc
gcgctgcactccgagccgcagtcgacccgcgcactggagagccaggtcgacctcaggccg
tccacgctcgaactgctcctgaaggtgctcgacgtggatggggccgtcaagcgcgtcgcg
aagggctggatcagcacgggcacgccgtggacatacgaccgggagcggtacgagcggatc
gccgccgcgcgcaccgcggagcagcagtcgatgctcgattacgagtccaccggcgagtgc
cgcatgatgttcctccagcgcgcgctcgacgacccggatgctcagccatgcggtcgctgc
gacaactgcgcgggcgcctggtatccggccgcgatcaacgactcggcgagctcgtcggtg
gcgtccgctctcgacagggtcggggtcgagatcgaaccgcgcaagctgtggccgacgggt
gctgaccggctgggcgtgccggtgaagggcaagatcggacaggacgagcagctggagccg
gggagggcgctcgcccggctcaccgacctcggctggggcggcccgttgcgcgaactgctc
gggccgggagccgtcgaccagccgtgccctcccgcgctgctggccgcgtgcatccgggtg
ctggccgactggaactgggcggagcgcccggccgcggtggtggcgatgccgtctcgccgc
cgtccgcaattcgtgcagtcgctggcgcgtggcttcgccgacgccgggcggctcccgttc
gccggcacgctcgacctggtcgacggcggtccgtccggcgaggccggaggaaacagcgcg
ttccgtctgtcgtcggtgtggaaccgcttctccgccgacgcgttggacctgccccagggc
gtgccggtgctgctcgtggacgacctggtcgacagccgctggacgatcacggtggccggg
cgcacgctgcggcaggctggcgcgtctgccgtgctgccgttcgcggccgcgctgcgggcg
tga
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