Leifsonia sp. PS1209: HF024_04625
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Entry
HF024_04625 CDS
T06547
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
leif
Leifsonia sp. PS1209
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leif03032
]
HF024_04625 (topA)
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_04625 (topA)
Enzymes [BR:
leif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HF024_04625 (topA)
DNA replication proteins [BR:
leif03032
]
Prokaryotic type
DNA Topoisomerases
HF024_04625 (topA)
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HF024_04625 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QIZ97872
UniProt:
A0A6H1W2G0
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All DBs
Position
949656..952475
Genome browser
AA seq
939 aa
AA seq
DB search
MSDTKKLVIVESPNKVKSIAQYLGDGYEVMASVGHIRDLIEPKNLPPELKKGSLGKFSVD
VEKGFEPYYVVSDQKKKTVADLKRALKNADELLLATDEDREGEAIAWHLIEVLQPKVPVK
RMVFHEITKEAIEKARDNTREIDTALVDAQETRRILDRLYGYEVSPVLWRKVGPGLSAGR
VQSAATRLVVDRERERLAFVPASYWGLTAHFTPEEANGFEARLARLSGERVATGRDFDDH
GKLTSNARTLDEETATSLAAAISQPSTVVTVGKVDSKPYSRRPAAPFTTSTMQQEAARKL
RFSAKQTMSVAQSLYESGYITYMRTDSASLSQQATNAARTQAAKLYGPETVPDKPRTYAS
KSKNAQEAHEAIRPSGEVFRTPAELEKVLRGNEFRLYDLIWKRTVASQMADAKGQTASVT
VETKITEGVHDGTVGEFTASGTVITFRGFLNAYEESKDEERNSSDSADAKLPPLQVGQEL
HVQDVEADGHETTPPPRYTEASLVKALEELGIGRPSTFASIISTIVDRGYVTPRGQALVP
SWVAFSVVRLLEDYFGDLVQYDFTAEMEDDLDRIADGEAERVDWLNSFYFGSDKHTGLRR
VIDNMGEIDARSINSIAIDDDVTLRIGKYGPYLEVAEEGAAEGATPRRVNIPPELAPDEL
TPAKAHELIEAPVLTDRVLGVNPENGKNIVAKDGRFGPYVTEIDPEEAAAETVDQATGEV
VAAPAKKPAKKAAAAKPRTASLFKSMDLATLDLDTALQLLDLPRTVGIDPESGEEIQAQN
GRYGAYLKKGTDTRSLTNEDDIFGIDLAGALELFAQPKYGNRRASSALKEFDADPVSGKA
IKVKDGRFGPYVTDGETNATIPRGETVDEVDFERAVQLLADKRAKGPAKKAPAKKAPAKK
APAKKPAAKTTAAKTTAAKTTAAKTTTTRKAAATKPAAE
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacacgaagaaactcgtcatcgtcgagtcaccgaacaaggtgaagtcgatcgct
cagtatctgggtgacggctacgaggtgatggcatccgtcggacacatccgcgacctcatc
gagcccaagaaccttccgcccgagctcaagaagggctcgctcggcaagttctccgtcgac
gtcgagaagggcttcgagccctactacgtggtctccgaccagaagaagaagaccgtcgcc
gacctcaagcgggcgctcaagaacgccgacgaactcctcctcgcaacggatgaggaccgc
gaaggagaggccatcgcgtggcacctcatcgaggtgctgcagccgaaggtccccgtgaag
cggatggtgttccacgagatcaccaaagaagccatcgagaaggcacgggacaacaccaga
gagatcgacaccgcgctggtcgacgcccaggagaccaggcgcatcctggaccggctgtac
gggtacgaggtctcgcccgtgctgtggcgcaaggtcggccctggactgtccgccgggcgt
gttcagtccgccgcgaccaggctcgtcgtcgacagggagcgcgagcgtctcgcgttcgtc
cctgcctcgtactggggcctgaccgcacacttcacgccggaagaggcgaacggtttcgag
gccaggctcgcccggctgtccggcgagcgcgtcgccacagggcgcgacttcgacgaccac
ggaaagctcacgtccaacgcgcgcaccctggacgaggagaccgcgaccagcctcgccgcc
gccatctcgcagccgagcaccgtcgtcacggtcggcaaggtcgactccaagccgtactcc
cgccgcccggccgcgccgttcaccacgtcgaccatgcagcaggaggccgcgcgcaagctg
cgcttctccgcgaagcagacgatgagcgtcgcacagtcgctgtacgagagcggctacatc
acctatatgcgaaccgactccgcttcgctctcccagcaggccaccaacgcggcccgcacc
caggccgccaagctctacggaccggagacggttcctgacaagccgcgcacatacgcctcg
aagagcaagaacgcccaggaggcgcacgaggcgatccgcccgtccggtgaggtcttccgc
acgcccgccgagctcgagaaggtgctccgcggcaacgagttccgcctgtacgacctgatc
tggaagcgcaccgtcgcctcgcagatggccgatgccaagggacagaccgcctccgtcacg
gtcgagacgaagatcaccgagggcgtccacgacggcaccgtcggcgagttcaccgcgagc
ggcaccgtcatcacgttccgcggcttcctcaacgcatacgaggagagcaaggacgaagag
cgcaactcgtccgattccgccgacgccaagctgcctccgctgcaggtcggccaggagctg
cacgtccaggatgtggaggccgacggccacgagaccaccccgccgccgcgctacacggag
gccagcctcgtcaaggcgctcgaagagctgggcatcggccggccgtcgacgttcgcgagc
atcatctccacgatcgtcgaccgcgggtacgtcacgccccgcggccaggcactcgtcccg
agctgggtggcgttctccgtcgtccggctgctggaggactacttcggtgacctggtgcag
tacgacttcaccgccgagatggaagacgacctcgaccgcatcgccgacggcgaggccgag
cgcgtcgactggctgaacagcttctacttcggcagcgacaagcacaccggcctgcgccgc
gtcatcgacaacatgggtgagatcgacgcgcgcagcatcaactcgatcgccatcgacgac
gacgtgacgctgcggatcggcaagtacggcccatatctcgaagtcgccgaagaaggcgcg
gcagaaggggcaacgccccgccgggtgaacatcccgccggagctcgcccccgacgagctg
acgcccgcgaaggcgcacgagctcatcgaagcgcccgtcctcaccgaccgtgtcctcggc
gtgaaccccgagaacggcaagaacatcgtcgcgaaagacggccggttcgggccgtacgtg
accgagatcgacccggaagaggccgctgcggagaccgtcgaccaggccacgggagaagtc
gtcgccgctccggccaagaagccggcgaagaaggcagcggccgcgaagccgcgcacggcg
tccctgttcaagtcgatggatctcgcgaccctcgacctcgacaccgccctgcagctgctc
gacctgccgcgcacggtcgggatcgaccccgagagcggggaagagatccaggcccagaac
ggacggtacggcgcatacctcaagaagggcacggacacccgttcgctgaccaacgaggac
gacatcttcggcatcgacctggcgggggcgctcgaattgttcgcgcagcccaagtacggc
aaccgccgggcgtcgagcgcgctcaaggagttcgacgccgaccccgtcagcggcaaggcg
atcaaggtcaaggacggccggttcggcccgtacgtgaccgacggcgagacgaacgcgacc
atcccgcgcggcgagacggtcgacgaggtcgacttcgagcgggccgtgcagctgctcgct
gacaagcgcgcgaagggtccggcgaagaaggcgcccgccaaaaaggctccggccaagaag
gcgcccgcgaagaagcctgcggcgaagaccacggcggcgaagacgaccgcggcgaagacg
acagcagccaagaccaccaccacacgcaaggcggcggccacgaaaccggcagcggagtga
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