Leifsonia sp. PS1209: HF024_05950
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Entry
HF024_05950 CDS
T06547
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF024_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_05950
Enzymes [BR:
leif01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
HF024_05950
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HF024_05950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIZ98106
UniProt:
A0A6H1W342
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All DBs
Position
complement(1242018..1242593)
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AA seq
191 aa
AA seq
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MRFTRAELESYRGAELPDVLSDGVELVFAGINPGLRSAAIGASFANRGNRFYPALRLAGI
TDRVIDSSEGFLPDDRDHLARRKVGLTTLVNFATAKASELTDEQLIAGRGRLERVAERYR
PRVIALLGVTAYRVAFAEPRAVPGRQDRMLGASTVWVVPSPSGLNAHYSLPQLAAAYREA
AAAAGIDVGEE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttcacgcgcgcggagctcgagtcctaccggggcgccgaactgccggacgttctc
agcgacggagttgaactcgtcttcgccggcatcaaccccggactgcgcagtgcggccatc
ggagcgagcttcgccaaccggggcaaccgcttctaccccgcgctgcggctggccggtatc
accgacagggtgatcgactcgtccgagggcttcctccccgacgaccgcgaccacctcgcg
cgccggaaggtcgggctgaccaccctggtgaacttcgcgacggcgaaggcgtccgaactc
accgacgagcagctgatcgccgggcgggggcgactcgagcgggtggcggagaggtaccgt
ccgcgcgtgatcgcgttgctcggcgtgaccgcctaccgtgtcgccttcgctgagccacgc
gcggtgcccggccgacaggacaggatgctcggcgcatccactgtctgggtggtgccgagc
ccgagcggactcaacgcgcactattcgctcccccagctggccgccgcataccgggaggcg
gcggcggcagccgggatcgacgtcggcgaggagtag
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