KEGG   Leifsonia sp. PS1209: HF024_05950
Entry
HF024_05950       CDS       T06547                                 
Name
(GenBank) mismatch-specific DNA-glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
leif  Leifsonia sp. PS1209
Pathway
leif03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:leif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HF024_05950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:leif03400]
    HF024_05950
Enzymes [BR:leif01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     HF024_05950
DNA repair and recombination proteins [BR:leif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HF024_05950
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: QIZ98106
UniProt: A0A6H1W342
LinkDB
Position
complement(1242018..1242593)
AA seq 191 aa
MRFTRAELESYRGAELPDVLSDGVELVFAGINPGLRSAAIGASFANRGNRFYPALRLAGI
TDRVIDSSEGFLPDDRDHLARRKVGLTTLVNFATAKASELTDEQLIAGRGRLERVAERYR
PRVIALLGVTAYRVAFAEPRAVPGRQDRMLGASTVWVVPSPSGLNAHYSLPQLAAAYREA
AAAAGIDVGEE
NT seq 576 nt   +upstreamnt  +downstreamnt
gtgaggttcacgcgcgcggagctcgagtcctaccggggcgccgaactgccggacgttctc
agcgacggagttgaactcgtcttcgccggcatcaaccccggactgcgcagtgcggccatc
ggagcgagcttcgccaaccggggcaaccgcttctaccccgcgctgcggctggccggtatc
accgacagggtgatcgactcgtccgagggcttcctccccgacgaccgcgaccacctcgcg
cgccggaaggtcgggctgaccaccctggtgaacttcgcgacggcgaaggcgtccgaactc
accgacgagcagctgatcgccgggcgggggcgactcgagcgggtggcggagaggtaccgt
ccgcgcgtgatcgcgttgctcggcgtgaccgcctaccgtgtcgccttcgctgagccacgc
gcggtgcccggccgacaggacaggatgctcggcgcatccactgtctgggtggtgccgagc
ccgagcggactcaacgcgcactattcgctcccccagctggccgccgcataccgggaggcg
gcggcggcagccgggatcgacgtcggcgaggagtag

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