Leifsonia sp. PS1209: HF024_06730
Help
Entry
HF024_06730 CDS
T06547
Name
(GenBank) tandem-95 repeat protein
KO
K20276
large repetitive protein
Organism
leif
Leifsonia sp. PS1209
Pathway
leif02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HF024_06730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
K319L-like_PKD
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
SsfX3_N
Motif
Other DBs
NCBI-ProteinID:
QIZ98241
UniProt:
A0A6H1W5T8
LinkDB
All DBs
Position
1410570..1416524
Genome browser
AA seq
1984 aa
AA seq
DB search
MIGAWIAAHKSLVATVTSSTAVVALVTTLAVVSGGYSAQHLQLGDAAVWVASGAKKSLGR
ANTEIDKLNSVVTGTGEAIDVVQDGSNVLLLDKETNTLAVVDPATSEAGKSVALPPRSPR
VDISGDHVSLLSQATGQLWLTTVPQLDQFNAGSGSTIDLGGRTIAAMDPAGALFAYLPDT
KTVTRIDVTGSEPTTTSQKVPTTGDGAAAALTIVGGKWALFDPDARAVYLAGRTVDLSGF
LRTGDDAVVQQPSASGDAVWIATNSGLIEVPLDGTKPSRAFADASGAPAAPITVGDCTYA
AWAGGAAWSTCDASGAGKASTLSEVPGGAALAFRANTGRVVLNDAKSGVSWAVQSGNTRI
DNWDELVAKKNTKELVDQSRQDTTPQYEKQQQPPVAVDDQFGARPGRVTPLPVLLNDYDP
NGDVLTIDSFTGIPVEQGTLELTNSNQQLQITLPDTASGTIAFDYTISDGRGGTASAHVV
VSVRLPTENSPPVCARAAKAVVQAGGRVTSSVLSECYDPDGDSFFLAGASVPGPDTVTFT
PQGQVAFSDHGQGGDLKDVSLVVSDALAQGTGTLAVTVRAPGQVPIIADPFAVLAYQGQE
VTVQPLAHVRGGNGTVRLSNVPSKADATITPDYQGGTFRFDSDQVGTHNIEYTVSDGVVT
STGTVRIDVKAPPGAKTAPIAVPHTAFIREQTTQDVDVLSTDIDPSGGVLLVTGVTAPPP
TSGVRVEILGQRTLRVTLNRPLAGPMDFHYQLSNGLADAVGTVTVVQLPPLTVHQPPIAA
PDSVSVRVDDVVDIPVLTNDIQPDGDKLTLDPTLATPLPSGAGLLFASGSQLRYLAPSKP
GNFTAAYKVFGEDGQWATAEVNIAVRERDEATNNPPVPKTVTARVLAGDTVRITVPLSGI
DPDGDSVQFIGQETNPQKGAVIASGADWMDFQAGDYAAGTDTFSYAVVDALGARATGTVR
VGIAPRVDGARNPVAVEDDVTTRPGKTLNIQVLANDSDPDGSPLTVTKVSSLDGKAKAKI
TDDIVVVTAPKAEGTYGFLYTIQNQRGGTSENFVRVTVSANAPPARPVVSDTSLGLSDIL
GKDRVNVNVLANVFFADGPVSSLKLQLVPGYGTSAQVTANKRIRITIGAKSQIIPFKVTN
PDDESISGYGFVHIPGYNDALPQVKRGAPDLTVVSEKTLTIHLNDYIVAVGGRKVRLTDA
ATVRATHANGDDLVVNNDTLQYTSTSRYFGPASISFQVTDGTSAGDPNGNVATIVLPIQV
TARQNQPPVFTGALIDFEPGQTKTVDLTKLTSYPYAKDQNELAFSIQDPKPDGVSVSLDG
RKLTIAVAAGTAKGAHPSIAIGVRDAVNAGQPGRIDLNVVPSTRPLASPQSDTVIAPRGQ
TTSVDVLANDKATNPFPDKPLRVVGVRGLGSSDLPSGVTITPSADNSTLSIQVSATAAPA
DATVQYEVADATGDPDRYTWGTVTVSVQDKPAPVSNVQITAFADRSLTVSWIPGAFNNSP
ITGFEVTVANAATGQVFSTTPCATTSCAVQTPGNGPDNAVTIAVRAKNALGLSDPTAYTE
PVWSDVIPGAPSGLSSQPLDHGLRISWTKPADVPGASPISSYVVTLGGQTASLAVQRGDA
VGTQYSLNLADGSIANGAAIGYAVSSRNDFYAGRTSWNQSQSSGVPAGAPLVTGPAPTAT
PSMTDGSTATLSWPTVFSDNGKAITRYYAGVFQGSAMPNCTVTGVESGNPVLQVDPTSSS
FVSTAGTSTTFRGLQPNTSYNFVVYAYNGQGCTRSAFATATPRQAPGAPTAVSVSGPASS
FPDRYDFRLDGVTYRAGSGANPVVSYRLTGAGVNESGTITGTSGLLSGAGGNHYGIPLTL
TITQICEGYPDNSRLCSDPGSQLSVPLGVAVATDLGGIRFTTTPVPDTDPVTYTYAYTWT
SWPTGSYDSVTYSCDGGVTQTPMPAVGQTASCAPVDPSFPLVVSVTVGGSTYTQSYASSA
VPQG
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggtgcctggatcgcggcgcacaagtcgctcgtggcgaccgtgacgagcagcacg
gctgtcgtcgcgctcgtgacgacgctcgccgtcgtctccggcggatacagcgcccagcac
ttgcagctcggcgacgcggccgtctgggtggcgagcggagcgaagaagtcgctcggcagg
gccaacaccgagatcgacaagctgaactccgtggtcaccggcacgggggaggccatcgac
gtcgtccaggacggctcgaacgtgctgctgctcgacaaagagacgaacaccctcgccgtc
gtcgaccctgccaccagcgaggcgggcaagtccgtcgcgcttcccccgcgctcgccgcgg
gtcgacatctccggcgaccacgtctcgctgctctcgcaggcgacggggcagctctggctg
acgacggtgccgcagctcgatcagttcaacgcgggctccggctcgaccatcgacctcggc
ggacggaccatcgcggcgatggatcccgccggcgcgctgttcgcctacctgccggacacg
aagacggtcaccaggatcgacgtgacgggctccgagccgacgaccacctcgcagaaggtg
ccgacgacgggcgacggagccgcggcggcgctcaccatcgtcggtggcaagtgggcgctc
ttcgatccggatgcgcgtgccgtctacctggcggggaggaccgtcgacctctccggcttc
ctccgcaccggcgacgacgccgtcgttcagcagccgtccgcctccggggacgcggtgtgg
atcgcgaccaactccggactcatcgaggtgccgctcgacggcacgaagccgtcccgcgcg
ttcgcggacgcgtccggcgcgccggcggctcccatcaccgtcggcgactgcacgtacgcc
gcgtgggccggaggagccgcgtggtcgacgtgcgacgcatccggtgcaggaaaggcctcg
acgctcagcgaggttcccggcggagcggcgctcgccttccgcgccaacacgggcagggtc
gtgctgaacgacgccaagtccggcgtctcctgggccgtgcagagcggcaacacgcgcatc
gacaactgggacgagctcgtcgccaagaagaacaccaaggaactcgtcgaccagtccagg
caggacacgacaccgcagtacgagaagcagcagcagcctccggtcgcggtcgacgaccag
ttcggcgcgcggccgggacgcgtgacaccgctgccggtgctgctcaacgactacgacccg
aacggcgacgtgctcacgatcgactcgttcacgggcatcccggtcgagcagggcaccctc
gagctgaccaacagcaaccagcagctgcagatcaccctgccggacacggcgagcggcacg
atcgcgttcgactacaccatctcggacggcaggggaggtacggcgtccgcccacgtggtg
gtgagcgtgcgcctgcccaccgagaactccccgccggtctgcgccagggcggcgaaggcc
gtcgtacaggcgggaggccgggtcaccagctcggtgctcagcgagtgctacgacccggat
ggcgactccttcttcctcgccggggcgagcgttcccggcccggacaccgtgacattcacg
ccgcagggtcaggtcgcgttctccgaccacggccagggcggcgacctcaaagatgtgagc
ctggtggtgtccgacgccctcgcccaggggacggggacgctcgccgtcaccgtgcgcgcg
cccggccaggtgccgatcatcgccgacccgttcgccgtcctcgcctatcagggccaggag
gtgacggtgcagccgctcgcgcacgtgcgcggcgggaacggcaccgtgcggctgagcaac
gtcccgagcaaggccgacgcgacgatcacgcccgactaccagggcggcacgttccgcttc
gactccgaccaggtcgggacgcacaacatcgagtacacggtctccgacggcgtcgtcacc
tccaccggcaccgtccggatcgacgtgaaggccccgcccggcgccaagacggcgcccatc
gcggtgccgcacaccgcgttcatccgggagcagaccacccaggacgtggatgtgctctcc
accgacatcgacccgtccggcggcgtgctgctggtcaccggggtcaccgcgccgccgccg
accagcggcgtccgcgtcgagatcctcggccagcgcacgctgcgcgtgacgctcaaccgt
ccgctcgccggcccgatggacttccactaccagctgagcaacggcctcgccgacgcggtc
ggcacggtgacggtcgtgcagctgccgccgttgaccgtgcaccagccgccgatcgcggcg
ccggactccgtctcggtgcgcgtggacgacgtggtcgacatcccggtgctcaccaacgac
atccagccggacggcgacaagctcaccctcgacccgacgctggcgacgccgctgccgtcc
ggcgccggcctgctcttcgcgagcggcagccagctgcgctacctcgcgccgtcgaagccg
ggcaacttcacggcggcgtacaaggtgttcggcgaggacggccagtgggcgaccgccgag
gtcaacatcgccgtccgcgaacgcgacgaggccacgaacaacccgcccgtgccgaagacg
gtgacggcgcgcgtgctcgccggcgacacggtccgcatcacggtgccgctgtccggcatc
gaccccgacggcgactccgtgcagttcatcgggcaggagacgaacccgcagaagggcgcc
gtgatcgcctccggcgcggactggatggacttccaggccggagactacgcggcaggcacc
gacacgttcagctacgcggtggtggatgcgctcggcgcgcgggccacggggacggtcagg
gtcggcatcgccccgcgcgtcgacggagcgcggaaccccgtcgcggtcgaggacgacgtg
acgacccggccgggcaagaccctgaacatccaagtgctcgccaatgacagcgacccggac
gggagcccgttgacggtcaccaaggtgtcgtcgctcgatggcaaggcgaaggcgaagatc
accgacgacatcgtggtcgtcaccgcgccgaaggccgaagggacgtacggcttcctctac
acgatccagaaccagcgcggcggcacgagcgagaacttcgtgcgcgtgacggtcagcgcg
aacgcccctcccgcgcgtccggtggtctccgacacgtcgctcggcctgtcggacatcctg
ggcaaggacagggtcaacgtcaacgtgctggccaacgtgttcttcgcggacgggccggtc
tcctcgctcaagctgcaactggtgcccggctacggcaccagcgcccaggtgacggccaac
aagcggatcaggatcacgatcggcgccaagagccagatcatcccgttcaaggtcaccaac
ccggacgacgagtcgatctcgggctacgggttcgtgcacatccccggatacaacgacgcc
cttccgcaggtgaagcgcggcgcccccgacctcaccgtggtcagcgagaagacgctgacg
atccacctcaacgactacatcgtggccgtcggcggacgcaaagtgcggctgacggacgcg
gcgaccgtgcgggcgacgcacgcgaacggcgacgacctcgtcgtcaacaacgacaccctg
cagtacacgagcacgtcgcgctacttcgggccggcatccatctcgttccaggtgacggac
ggcacgtccgccggcgacccgaacggcaacgtcgccaccatcgtgctgccgatccaggtc
acggcgcggcagaaccagcccccggtgttcaccggggcgctgatcgacttcgagcccggg
cagacgaagacggtcgacctcacgaagctcaccagctacccgtatgcgaaagaccagaac
gagctggccttcagcatccaggacccgaaacccgacggcgtctccgtctcgctcgacggg
cgcaagctcacgatcgcggtcgccgccggcaccgcgaagggcgcgcatccctcgatcgcg
atcggggtgcgggatgcggtcaacgccgggcagccagggcgcatcgacctcaacgtggtg
ccgtccaccaggccgctggcgagtccgcagtccgacaccgtgatcgcgccccgcggccag
acgacgagcgtggatgtgctcgccaacgacaaggcgaccaacccgttccccgacaagccg
ctcagggtcgtcggcgtgcgcgggctgggcagcagcgacctgccgagcggggtcaccatc
acgccgagcgcggacaactcgactctgagcatccaggtgtctgcgacggcggcgcccgcc
gacgcgaccgtgcagtacgaggtggcggatgcgacgggcgaccccgacaggtacacctgg
ggaacggtcaccgtgtccgtgcaggacaagccggcccccgtctcgaacgtgcagatcacg
gcgttcgccgaccggtcgctgacggtgtcgtggatccccggcgcgttcaacaactcgccg
atcaccgggttcgaggtgaccgtcgcgaacgcggcgacgggccaggtcttctcgaccacg
ccgtgcgcgacgaccagctgcgccgtccagacgccgggcaacggccccgacaacgccgtc
accatcgccgtgcgggcgaagaacgcgctcgggctgtccgacccgaccgcatacacagag
ccggtctggtcggacgtgatccccggagccccgtccgggctgtcgtcgcagccgctcgac
cacggactgcggatcagctggaccaagccggccgacgtgccgggcgccagcccgatcagc
tcgtacgtggtcaccctcggcggacagaccgcctcgctcgccgtgcagcgcggcgacgcg
gtcggcacccagtactcgctcaacctcgcggacggcagcatcgcgaacggcgcagccatc
ggatacgcggtgtcgtcccgcaacgacttctacgccgggcgcacaagctggaaccagagc
cagagcagcggcgtgcccgccggcgctccgctcgtcaccggcccggcgccgacggcgacg
ccgagcatgacggacgggtcgacggccacgctgagctggccgacggtgttcagcgacaac
ggcaaagcgatcacccgctactacgccggtgtcttccagggctcggcgatgccgaactgc
acggtcacgggtgtcgagtccggcaaccccgtgctgcaggtggaccccacctcgtcgtcg
ttcgtctcgacggcgggcacgagcaccacgttccgggggctgcagccgaacacgagctac
aacttcgtggtctacgcgtacaacggacagggatgcacgcgcagcgccttcgcgacggcc
accccgcggcaggcaccgggggctccgaccgccgtgagcgtgtccgggccggcgtccagc
ttcccggaccgctacgacttccggctcgacggcgtgacgtaccgcgccggcagtggggcc
aacccggtcgtctcctaccggctgaccggcgcgggcgtcaacgagtccggcacgattacg
ggcacctcggggctgctgtctggcgcgggtggcaaccattacggcataccgctcaccctc
acgatcactcagatctgcgagggctaccccgacaactcccgactgtgcagcgatccgggc
agccagctcagcgtgccgctcggggtggccgtcgccaccgacctcggcgggatccggttc
accaccacgccggtcccggacaccgaccccgtgacgtacacctacgcgtacacctggacg
tcgtggccgaccggctcctacgactcggtgacgtacagctgcgacggcggcgtcacccag
acgccgatgcccgccgtcggtcagaccgcatcctgtgccccggtggacccgagcttcccg
ctggtcgtctccgtgaccgtcggcggcagcacgtacacccagagctacgcgagttctgcc
gtgccgcaagggtag
DBGET
integrated database retrieval system