Leifsonia sp. PS1209: HF024_07490
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Entry
HF024_07490 CDS
T06547
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leif
Leifsonia sp. PS1209
Pathway
leif03420
Nucleotide excision repair
leif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF024_07490
03430 Mismatch repair
HF024_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leif03400
]
HF024_07490
Enzymes [BR:
leif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF024_07490
DNA repair and recombination proteins [BR:
leif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF024_07490
MMR (mismatch excision repair)
Other MMR factors
HF024_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
DUF6894
Motif
Other DBs
NCBI-ProteinID:
QIZ98374
UniProt:
A0A6H1W5I6
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All DBs
Position
1575442..1577202
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AA seq
586 aa
AA seq
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MNPDSLLDGLDAQQRVAAEALLGPVCILAGAGTGKTRAITHRIAYGVASGAYAPNRVMAL
TFTNRAAAELRGRLRQLGAGGVAARTFHAAALSQLNFFWPQVVGGQLPSVLDGKGRVLGQ
AAERLKLRVDTATLRDVAAEVEWRKVSGLSIEQYASAVADRTVPGTLTAEQLVLMLQTYE
DLKDERKQIDFEDVLLVCAGMIEIEPAVAMQVREQYRFFVVDEYQDVSPLQQQLLDLWLG
GRRDVCVVGDASQTIYSFAGARSAYLLDFERTHPGATVVRLEQNYRSTPAVVDAANRLMR
GRAGALTLHSAAAVVATPGEAATGAVTPGAVDSAAPGIPSPTAYESDRDEARAVAQKIAA
ELAAGAKPEDIAILYRVNVQAAAIEQALGDLGISYQIRGSKRFFDLPEVRQAIMSLRAAS
VAVGDEPLFKSVSDVLRSLGWSQEPPETRGAVRDRWESLNAIMGLVDTMPPGTSFRRFTD
ELLTRQAGQHEPTLSAVTLATLHSAKGLEWESVYLVGLSEGLVPISYAKSFEQIDEERRL
LYVGITRARSNLQLSWSQSGQYAGRSSVRQPSRFLAEMAPHVPVSR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggacagtctgctcgacgggctggatgcgcagcagagggtcgccgccgaggcg
ctgctcgggccggtctgcatcctggccggcgccggcacgggcaagacgcgcgcgatcacg
catcgcatcgcgtacggcgtggcctccggcgcgtacgcgccgaaccgcgtgatggcgctc
accttcaccaaccgtgcggcggccgaactgcgcgggaggctgcgccagctcggcgcgggc
ggtgtcgcggcgcgcaccttccacgccgctgcgctgtcccaattgaacttcttctggccg
caggtggtcggcggccagctgccgagcgtgctcgacggcaagggcagggtgctcggccag
gcggccgagcgcctgaaactgcgcgtcgacacggcgaccctgcgcgacgtggccgccgag
gtggagtggcgcaaggtgtccgggctcagcatcgagcagtacgcctccgccgtcgcggac
cgcacggtgccgggcaccctcaccgccgagcagctggtgctgatgctgcagacgtacgaa
gacctcaaagacgagcggaagcagatcgacttcgaggacgtgctgctcgtctgcgcgggg
atgatcgagatcgagccggccgtggcgatgcaggtgcgcgagcagtaccgcttcttcgtg
gtggacgaataccaggacgtctcgccgctgcagcagcagctcctcgacctgtggctcggc
ggcagacgcgacgtctgcgtggtcggcgacgccagccagacgatctattcgttcgccggg
gcgcgcagcgcgtacctgctcgacttcgagcggacgcatccgggagcgacggtggtgcgg
ctcgagcagaactaccgctcgacgcccgctgtggtggatgcggcgaaccggctcatgcgc
ggtcgcgcgggcgcgctgacgctgcactcggcagcagcggtggtggcgacgccgggcgag
gcggctacgggtgcggtcacgccgggtgcggtcgactctgctgcgccgggcatcccgtcg
ccgacggcgtacgagagcgaccgggacgaggcccgcgccgtcgcccagaagatcgccgcg
gagctcgcggcgggggcgaagccggaggacatcgcgatcctgtaccgggtgaacgtgcag
gccgccgccatcgagcaggcgctcggtgatctcggcatcagctaccagatccgaggctcc
aagcgcttcttcgacctgccggaggtgcgccaggcgatcatgtcgctgcgcgccgccagt
gtcgcggtcggcgacgaaccgctcttcaagtcggtcagcgacgtgctgcgctcgctgggc
tggagccaggagccgccggagacgcggggcgccgtacgtgaccgctgggagtcgctgaac
gccatcatgggcctggtcgacacgatgccgcccggcacgtcgttccgtcgcttcaccgac
gaactgctcacccgccaggccggccagcacgagccgaccctgtccgccgtgaccctggcg
accctgcactcggcgaagggcctggagtgggagtcggtctacctcgtcggcctcagcgag
gggctggtgccgatcagctatgcgaagagcttcgagcagatcgacgaggaacgccgcctg
ctctacgtcggcatcacccgggcgcgcagcaacctgcagctcagctggtcgcagtcgggc
cagtacgccggtcgctcctcggtgcgccagccgtcgcggttcctcgccgagatggccccg
cacgtgcccgtcagtcgctga
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